Nejvíce citovaný článek - PubMed ID 36859578
Palaeogenomics of Upper Palaeolithic to Neolithic European hunter-gatherers
UNLABELLED: This study investigates the underlying mechanisms driving the formation of the largest known burial site of the Northern European Mesolithic, Yuzhniy Oleniy Ostrov (YOO). Radiogenic strontium isotope analysis (87Sr/86Sr) was used to identify group dynamics within the cemetery and examine the site's place within local and supra-regional networks. The analysis of 57 humans and 31 animals was supported by the creation of an environmental baseline which identified four key geological zones and defines the strontium characteristics of Lake Onega. Only two individuals had strontium values indicating time spent outside of Lake Onega's northern shores, where the majority of the burial population is likely to have resided. These results suggest that the YOO cemetery predominantly served as a burial place for those with semi-permanent residence in this area, with no significant evidence for gender-based relocation patterns indicative of patri- or matrilocal residency. However, materials seem to have travelled towards Lake Onega even over great distances and the presence of the two outlier individuals suggests these exchanges also involved long-distance travel of people. Our results align with an increasing number of studies that suggest a high degree of residential stability for Late Mesolithic foraging groups relying primarily on aquatic resources, yet simultaneously places the Lake Onega community within a wider Mesolithic communication network. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s12520-024-02129-8.
- Klíčová slova
- Bioarchaeology, Geology, Hunter-gatherer-fishers, Mesolithic, Mobility, Strontium,
- Publikační typ
- časopisecké články MeSH
The North Eurasian forest and forest-steppe zones have sustained millennia of sociocultural connections among northern peoples, but much of their history is poorly understood. In particular, the genomic formation of populations that speak Uralic and Yeniseian languages today is unknown. Here, by generating genome-wide data for 180 ancient individuals spanning this region, we show that the Early-to-Mid-Holocene hunter-gatherers harboured a continuous gradient of ancestry from fully European-related in the Baltic, to fully East Asian-related in the Transbaikal. Contemporaneous groups in Northeast Siberia were off-gradient and descended from a population that was the primary source for Native Americans, which then mixed with populations of Inland East Asia and the Amur River Basin to produce two populations whose expansion coincided with the collapse of pre-Bronze Age population structure. Ancestry from the first population, Cis-Baikal Late Neolithic-Bronze Age (Cisbaikal_LNBA), is associated with Yeniseian-speaking groups and those that admixed with them, and ancestry from the second, Yakutia Late Neolithic-Bronze Age (Yakutia_LNBA), is associated with migrations of prehistoric Uralic speakers. We show that Yakutia_LNBA first dispersed westwards from the Lena River Basin around 4,000 years ago into the Altai-Sayan region and into West Siberian communities associated with Seima-Turbino metallurgy-a suite of advanced bronze casting techniques that expanded explosively from the Altai1. The 16 Seima-Turbino period individuals were diverse in their ancestry, also harbouring DNA from Indo-Iranian-associated pastoralists and from a range of hunter-gatherer groups. Thus, both cultural transmission and migration were key to the Seima-Turbino phenomenon, which was involved in the initial spread of early Uralic-speaking communities.
- MeSH
- Asijci * genetika MeSH
- běloch MeSH
- běloši genetika MeSH
- dějiny starověku MeSH
- etnicita * genetika MeSH
- genom lidský genetika MeSH
- haplotypy genetika MeSH
- jazyk (prostředek komunikace) * dějiny MeSH
- lidé MeSH
- lidský chromozom Y genetika MeSH
- migrace lidstva dějiny MeSH
- populační genetika MeSH
- starobylá DNA * analýza MeSH
- Check Tag
- dějiny starověku MeSH
- lidé MeSH
- mužské pohlaví MeSH
- Publikační typ
- časopisecké články MeSH
- historické články MeSH
- Geografické názvy
- Sibiř etnologie MeSH
- Názvy látek
- starobylá DNA * MeSH
Traditionally, lithic artefacts have served as the principal proxy for the definition of archaeological cultures in the Upper Paleolithic. However, the culture-historical framework in use, constructed unsystematically and shaped by regional research traditions, features a number of widely acknowledged drawbacks. Here we use personal ornaments to explore the nature of Early Upper Paleolithic cultural entities and establish to what extent they represent distinct or evolving cultural adaptations. We present an analysis of an updated georeferenced dataset composed of personal ornaments coming from two key successive Upper Paleolithic technocomplexes, the Aurignacian (42-34,000 years ago) and the Gravettian (34-24,000 years ago). Using a range of multivariate statistics, we demonstrate that, at both European and regional scales, people belonging to these technocomplexes wore similar personal ornaments, though fully-shaped personal ornaments appear more different between technocomplexes. We additionally show that the variability of the Aurignacian ornaments suggests more fragmented cultural clusters compared to the Gravettian, implying more extensive symbolic networks in the latter. Despite a long-standing consensus based on other archaeological proxies, which emphasises the dissimilarity between these cultural entities, our results demonstrate the complex nature of Upper Paleolithic cultures which are characterised by discontinuities in economic and technical systems and continuity in the culturalisation of the body.
- MeSH
- archeologie * MeSH
- dějiny starověku MeSH
- kultura * MeSH
- kulturní evoluce * MeSH
- lidé MeSH
- multivariační analýza MeSH
- Check Tag
- dějiny starověku MeSH
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- historické články MeSH
qpAdm is a statistical tool that is often used for testing large sets of alternative admixture models for a target population. Despite its popularity, qpAdm remains untested on 2D stepping stone landscapes and in situations with low prestudy odds (low ratio of true to false models). We tested high-throughput qpAdm protocols with typical properties such as number of source combinations per target, model complexity, model feasibility criteria, etc. Those protocols were applied to admixture graph-shaped and stepping stone simulated histories sampled randomly or systematically. We demonstrate that false discovery rates of high-throughput qpAdm protocols exceed 50% for many parameter combinations since: (1) prestudy odds are low and fall rapidly with increasing model complexity; (2) complex migration networks violate the assumptions of the method; hence, there is poor correlation between qpAdm P-values and model optimality, contributing to low but nonzero false-positive rate and low power; and (3) although admixture fraction estimates between 0 and 1 are largely restricted to symmetric configurations of sources around a target, a small fraction of asymmetric highly nonoptimal models have estimates in the same interval, contributing to the false-positive rate. We also reinterpret large sets of qpAdm models from 2 studies in terms of source-target distance and symmetry and suggest improvements to qpAdm protocols: (1) temporal stratification of targets and proxy sources in the case of admixture graph-shaped histories, (2) focused exploration of few models for increasing prestudy odds; and (3) dense landscape sampling for increasing power and stringent conditions on estimated admixture fractions for decreasing the false-positive rate.
- Klíčová slova
- qpAdm, admixture graphs, archaeogenetics, genetic admixture, simulation, stepping stone models,
- MeSH
- lidé MeSH
- modely genetické * MeSH
- populační genetika * metody MeSH
- software * MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
The European Final Palaeolithic witnessed marked changes in almost all societal domains. Despite a rich body of evidence, our knowledge of human palaeodemographic processes and regional population dynamics still needs to be improved. In this study, we present regionally differentiated population estimates for the Greenland Interstadial 1d-a (GI-1d-a; 14-12.7 ka cal BP) and the Greenland Stadial 1 (GS-1; 12.7-11.6 ka cal BP) for Southern, Western, Northern and Central Europe. The data were obtained by applying the Cologne Protocol, a geostatistical approach for estimating prehistoric population size and density, to a newly compiled dataset of Final Palaeolithic sites. On a large spatio-temporal scale and compared to preceding Upper Palaeolithic phases, areas north of the Alps become the dominant demographic growth area for the first time since the dispersal of anatomically modern humans into Europe. At smaller scales, we observe divergent regional trends, with a conspicuous lack of archaeological evidence appearing in previously occupied areas of central France and Germany. Our study also shows that during the Final Palaeolithic, the climatic cooling of GS-1 coincides with a pronounced population decline in most parts of the study area. An apparent increase in population density occurs only in north-eastern Central Europe and north-eastern Italy. Our estimates suggest that the total population was reduced by half. Similar results, with a relationship between decreasing temperatures and decreasing populations, have already been observed for the late phase of the Gravettian, when populations were reduced to only one third of those estimated for the early phase. Yet, in contrast to the collapse of local populations during the late Gravettian, the increase in population densities in Central Europe during GS-1 indicates population movements eastwards, possibly in response to deteriorating climatic conditions, particularly in western regions during the Younger Dryas.
- MeSH
- archeologie MeSH
- dějiny starověku MeSH
- hustota populace MeSH
- klimatické změny * dějiny MeSH
- lidé MeSH
- populační dynamika * MeSH
- Check Tag
- dějiny starověku MeSH
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- historické články MeSH
- Geografické názvy
- Evropa MeSH
The Yamnaya archaeological complex appeared around 3300 BC across the steppes north of the Black and Caspian Seas, and by 3000 BC it reached its maximal extent, ranging from Hungary in the west to Kazakhstan in the east. To localize Yamnaya origins among the preceding Eneolithic people, we assembled ancient DNA from 435 individuals, demonstrating three genetic clines. A Caucasus-lower Volga (CLV) cline suffused with Caucasus hunter-gatherer1 ancestry extended between a Caucasus Neolithic southern end and a northern end at Berezhnovka along the lower Volga river. Bidirectional gene flow created intermediate populations, such as the north Caucasus Maikop people, and those at Remontnoye on the steppe. The Volga cline was formed as CLV people mixed with upriver populations of Eastern hunter-gatherer2 ancestry, creating hypervariable groups, including one at Khvalynsk. The Dnipro cline was formed when CLV people moved west, mixing with people with Ukraine Neolithic hunter-gatherer ancestry3 along the Dnipro and Don rivers to establish Serednii Stih groups, from whom Yamnaya ancestors formed around 4000 BC and grew rapidly after 3750-3350 BC. The CLV people contributed around four-fifths of the ancestry of the Yamnaya and, entering Anatolia, probably from the east, at least one-tenth of the ancestry of Bronze Age central Anatolians, who spoke Hittite4,5. We therefore propose that the final unity of the speakers of 'proto-Indo-Anatolian', the language ancestral to both Anatolian and Indo-European people, occurred in CLV people some time between 4400 BC and 4000 BC.
- MeSH
- běloši genetika dějiny MeSH
- dějiny starověku MeSH
- Evropané MeSH
- fylogeneze MeSH
- haplotypy MeSH
- lidé MeSH
- migrace lidstva * dějiny MeSH
- mitochondriální DNA analýza MeSH
- populační genetika * MeSH
- řeky MeSH
- starobylá DNA analýza MeSH
- tok genů MeSH
- Check Tag
- dějiny starověku MeSH
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- historické články MeSH
- Názvy látek
- mitochondriální DNA MeSH
- starobylá DNA MeSH
qpAdm is a statistical tool that is often used for testing large sets of alternative admixture models for a target population. Despite its popularity, qpAdm remains untested on two-dimensional stepping-stone landscapes and in situations with low pre-study odds (low ratio of true to false models). We tested high-throughput qpAdm protocols with typical properties such as number of source combinations per target, model complexity, model feasibility criteria, etc. Those protocols were applied to admixture-graph-shaped and stepping-stone simulated histories sampled randomly or systematically. We demonstrate that false discovery rates of high-throughput qpAdm protocols exceed 50% for many parameter combinations since: 1) pre-study odds are low and fall rapidly with increasing model complexity; 2) complex migration networks violate the assumptions of the method, hence there is poor correlation between qpAdm p-values and model optimality, contributing to low but non-zero false positive rate and low power; 3) although admixture fraction estimates between 0 and 1 are largely restricted to symmetric configurations of sources around a target, a small fraction of asymmetric highly non-optimal models have estimates in the same interval, contributing to the false positive rate. We also re-interpret large sets of qpAdm models from two studies in terms of source-target distance and symmetry and suggest improvements to qpAdm protocols: 1) temporal stratification of targets and proxy sources in the case of admixture-graph-shaped histories; 2) focused exploration of few models for increasing pre-study odds; 3) dense landscape sampling for increasing power and stringent conditions on estimated admixture fractions for decreasing the false positive rate.
- Klíčová slova
- admixture graphs, archaeogenetics, genetic admixture, qpAdm, simulation, stepping-stone models,
- Publikační typ
- časopisecké články MeSH
- preprinty MeSH
Modern humans arrived in Europe more than 45,000 years ago, overlapping at least 5,000 years with Neanderthals1-4. Limited genomic data from these early modern humans have shown that at least two genetically distinct groups inhabited Europe, represented by Zlatý kůň, Czechia3 and Bacho Kiro, Bulgaria2. Here we deepen our understanding of early modern humans by analysing one high-coverage genome and five low-coverage genomes from approximately 45,000-year-old remains from Ilsenhöhle in Ranis, Germany4, and a further high-coverage genome from Zlatý kůň. We show that distant familial relationships link the Ranis and Zlatý kůň individuals and that they were part of the same small, isolated population that represents the deepest known split from the Out-of-Africa lineage. Ranis genomes harbour Neanderthal segments that originate from a single admixture event shared with all non-Africans that we date to approximately 45,000-49,000 years ago. This implies that ancestors of all non-Africans sequenced so far resided in a common population at this time, and further suggests that modern human remains older than 50,000 years from outside Africa represent different non-African populations.
- MeSH
- biologická evoluce * MeSH
- časové faktory MeSH
- fylogeneze MeSH
- genetika člověka MeSH
- genom lidský * MeSH
- lidé MeSH
- neandertálci * genetika klasifikace MeSH
- starobylá DNA analýza MeSH
- zkameněliny MeSH
- zvířata MeSH
- Check Tag
- lidé MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- Geografické názvy
- Evropa MeSH
- Německo MeSH
- Názvy látek
- starobylá DNA MeSH
Horses revolutionized human history with fast mobility1. However, the timeline between their domestication and their widespread integration as a means of transport remains contentious2-4. Here we assemble a collection of 475 ancient horse genomes to assess the period when these animals were first reshaped by human agency in Eurasia. We find that reproductive control of the modern domestic lineage emerged around 2200 BCE, through close-kin mating and shortened generation times. Reproductive control emerged following a severe domestication bottleneck starting no earlier than approximately 2700 BCE, and coincided with a sudden expansion across Eurasia that ultimately resulted in the replacement of nearly every local horse lineage. This expansion marked the rise of widespread horse-based mobility in human history, which refutes the commonly held narrative of large horse herds accompanying the massive migration of steppe peoples across Europe around 3000 BCE and earlier3,5. Finally, we detect significantly shortened generation times at Botai around 3500 BCE, a settlement from central Asia associated with corrals and a subsistence economy centred on horses6,7. This supports local horse husbandry before the rise of modern domestic bloodlines.
- MeSH
- chov zvířat * dějiny MeSH
- dějiny starověku MeSH
- domestikace * MeSH
- doprava * dějiny metody MeSH
- fylogeneze MeSH
- genom genetika MeSH
- koně * klasifikace genetika MeSH
- rozmnožování MeSH
- zvířata MeSH
- Check Tag
- dějiny starověku MeSH
- mužské pohlaví MeSH
- ženské pohlaví MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- historické články MeSH
- Geografické názvy
- Asie MeSH
- Evropa MeSH
The Yamnaya archaeological complex appeared around 3300BCE across the steppes north of the Black and Caspian Seas, and by 3000BCE reached its maximal extent from Hungary in the west to Kazakhstan in the east. To localize the ancestral and geographical origins of the Yamnaya among the diverse Eneolithic people that preceded them, we studied ancient DNA data from 428 individuals of which 299 are reported for the first time, demonstrating three previously unknown Eneolithic genetic clines. First, a "Caucasus-Lower Volga" (CLV) Cline suffused with Caucasus hunter-gatherer (CHG) ancestry extended between a Caucasus Neolithic southern end in Neolithic Armenia, and a steppe northern end in Berezhnovka in the Lower Volga. Bidirectional gene flow across the CLV cline created admixed intermediate populations in both the north Caucasus, such as the Maikop people, and on the steppe, such as those at the site of Remontnoye north of the Manych depression. CLV people also helped form two major riverine clines by admixing with distinct groups of European hunter-gatherers. A "Volga Cline" was formed as Lower Volga people mixed with upriver populations that had more Eastern hunter-gatherer (EHG) ancestry, creating genetically hyper-variable populations as at Khvalynsk in the Middle Volga. A "Dnipro Cline" was formed as CLV people bearing both Caucasus Neolithic and Lower Volga ancestry moved west and acquired Ukraine Neolithic hunter-gatherer (UNHG) ancestry to establish the population of the Serednii Stih culture from which the direct ancestors of the Yamnaya themselves were formed around 4000BCE. This population grew rapidly after 3750-3350BCE, precipitating the expansion of people of the Yamnaya culture who totally displaced previous groups on the Volga and further east, while admixing with more sedentary groups in the west. CLV cline people with Lower Volga ancestry contributed four fifths of the ancestry of the Yamnaya, but also, entering Anatolia from the east, contributed at least a tenth of the ancestry of Bronze Age Central Anatolians, where the Hittite language, related to the Indo-European languages spread by the Yamnaya, was spoken. We thus propose that the final unity of the speakers of the "Proto-Indo-Anatolian" ancestral language of both Anatolian and Indo-European languages can be traced to CLV cline people sometime between 4400-4000 BCE.
- Publikační typ
- časopisecké články MeSH
- preprinty MeSH