Rapidly developing yeast microcolonies differentiate in a similar way to aging giant colonies
Jazyk angličtina Země Spojené státy americké Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
23970946
PubMed Central
PMC3736409
DOI
10.1155/2013/102485
Knihovny.cz E-zdroje
- MeSH
- amoniak metabolismus MeSH
- kvasinky metabolismus MeSH
- signální transdukce fyziologie MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- amoniak MeSH
During their development and aging on solid substrates, yeast giant colonies produce ammonia, which acts as a quorum sensing molecule. Ammonia production is connected with alkalization of the surrounding medium and with extensive reprogramming of cell metabolism. In addition, ammonia signaling is important for both horizontal (colony centre versus colony margin) and vertical (upper versus lower cell layers) colony differentiations. The centre of an aging differentiated giant colony is thus composed of two major cell subpopulations, the subpopulation of long-living, metabolically active and stress-resistant cells that form the upper layers of the colony and the subpopulation of stress-sensitive starving cells in the colony interior. Here, we show that microcolonies originating from one cell pass through similar developmental phases as giant colonies. Microcolony differentiation is linked to ammonia signaling, and cells similar to the upper and lower cells of aged giant colonies are formed even in relatively young microcolonies. A comparison of the properties of these cells revealed a number of features that are similar in microcolonies and giant colonies as well as a few that are only typical of chronologically aged giant colonies. These findings show that colony age per se is not crucial for colony differentiation.
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Bonhomme J, d'Enfert C. Candida albicans biofilms: building a heterogeneous, drug-tolerant environment. Current Opinion in Microbiology. 2013 PubMed
Cantarelli C, Martini A. On the pellicle formation by “flor” yeasts. Antonie van Leeuwenhoek. 1969;35:F35–F36. PubMed
Engelberg D, Mimran A, Martinetto H, et al. Multicellular stalk-like structures in Saccharomyces cerevisiae . Journal of Bacteriology. 1998;180(15):3992–3996. PubMed PMC
Hawser SP, Douglas LJ. Biofilm formation by Candida species on the surface of catheter materials in vitro . Infection and Immunity. 1994;62(3):915–921. PubMed PMC
Lindegren CC, Hamilton E. Autolysis and sporulation in the yeast colony. Botanical Gazette. 1944;105:316–321.
Palkova Z. Multicellular microorganisms: laboratory versus nature. EMBO Reports. 2004;5(5):470–476. PubMed PMC
Palková Z, Váchová L. Life within a community: benefit to yeast long-term survival. FEMS Microbiology Reviews. 2006;30(5):806–824. PubMed
Piccirillo S, White MG, Murphy JC, Law DJ, Honigberg SM. The Rim101p/PacC pathway and alkaline pH regulate pattern formation in yeast colonies. Genetics. 2010;184(3):707–716. PubMed PMC
Reynolds TB, Fink GR. Bakers’ yeast, a model for fungal biofilm formation. Science. 2001;291(5505):878–881. PubMed
Zara G, Zara S, Pinna C, Marceddu S, Budroni M. FLO11 gene length and transcriptional level affect biofilm-forming ability of wild flor strains of Saccharomyces cerevisiae . Microbiology. 2009;155(12):3838–3846. PubMed
Zara S, Gross MK, Zara G, Budroni M, Bakalinsky AT. Ethanol-independent biofilm formation by a flor wine yeast strain of Saccharomyces cerevisiae . Applied and Environmental Microbiology. 2010;76(12):4089–4091. PubMed PMC
Kockova-Kratochvilova A. Yeasts and Yeast-Like Organisms. Weinheim, Germany: VCH; 1990.
Palkova Z, Janderova B, Gabriel J, Zikanova B, Pospisek M, Forstova J. Ammonia mediates communication between yeast colonies. Nature. 1997;390(6659):532–536. PubMed
Richards M. The use of giant-colony morphology for the differentiation of brewing yeast. Journal of the Institute of Brewing. 1966;73:162–166.
Granek JA, Magwene PM. Environmental and genetic determinants of colony morphology in yeast. PLoS Genetics. 2010;6(1)e1000823 PubMed PMC
Kuthan M, Devaux F, Janderová B, Slaninová I, Jacq C, Palková Z. Domestication of wild Saccharomyces cerevisiae is accompanied by changes in gene expression and colony morphology. Molecular Microbiology. 2003;47(3):745–754. PubMed
Váchová L, Štovíček V, Hlaváček O, et al. Flo11p, drug efflux pumps, and the extracellular matrix cooperate to form biofilm yeast colonies. Journal of Cell Biology. 2011;194(5):679–687. PubMed PMC
Palková Z, Devaux F, Řičicová M, Mináriková L, Le Crom S, Jacq C. Ammonia pulses and metabolic oscillations guide yeast colony development. Molecular Biology of the Cell. 2002;13(11):3901–3914. PubMed PMC
Váchová L, Devaux F, Kučerová H, Řičicová M, Jacq C, Palková Z. Sok2p transcription factor is involved in adaptive program relevant for long term survival of Saccharomyces cerevisiae colonies. Journal of Biological Chemistry. 2004;279(36):37973–37981. PubMed
Váchová L, Palková Z. Physiological regulation of yeast cell death in multicellular colonies is triggered by ammonia. Journal of Cell Biology. 2005;169(5):711–717. PubMed PMC
Čáp M, Váchová L, Palková Z. Yeast colony survival depends on metabolic adaptation and cell differentiation rather than on stress defense. Journal of Biological Chemistry. 2009;284(47):32572–32581. PubMed PMC
Vachova L, Kucerova H, Devaux F, Ulehlova M, Palkova Z. Metabolic diversification of cells during the development of yeast colonies. Environmental Microbiology. 2009;11:494–504. PubMed
Cap M, Stepanek L, Harant K, Vachova L, Palkova Z. Cell differentiation within a yeast colony: metabolic and regulatory parallels with a tumor-affected organism. Molecular Cell. 2012;46:436–448. PubMed
Váchová L, Chernyavskiy O, Strachotová D, et al. Architecture of developing multicellular yeast colony: spatio-temporal expression of Ato1p ammonium exporter. Environmental Microbiology. 2009;11(7):1866–1877. PubMed
Natarajan K, Meyer MR, Jackson BM, et al. Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast. Molecular and Cellular Biology. 2001;21(13):4347–4368. PubMed PMC
Váchová L, Palková Z. Aging and longevity of yeast colony populations: metabolic adaptation and differentiation. Biochemical Society Transactions. 2011;39(5):1471–1475. PubMed
Palková Z, Forstová J. Yeast colonies synchronise their growth and development. Journal of Cell Science. 2000;113(11):1923–1928. PubMed
Cunningham TS, Andhare R, Cooper TG. Nitrogen catabolite repression of DAL80 expression depends on the relative levels of Gat1p and Ure2p production in Saccharomyces cerevisiae . Journal of Biological Chemistry. 2000;275(19):14408–14414. PubMed PMC
Traven A, Janicke A, Harrison P, Swaminathan A, Seemann T, Beilharz TH. Transcriptional profiling of a yeast colony provides new insight into the heterogeneity of multicellular fungal communities. PLoS ONE. 2012;7e46243 PubMed PMC
Cottier F, Raymond M, Kurzai O, et al. The bZIP transcription factor Rca1p is a central regulator of a novel CO2 sensing pathway in yeast. PLoS Pathogens. 2012;8(1)e1002485 PubMed PMC
Janke C, Magiera MM, Rathfelder N, et al. A versatile toolbox for PCR-based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettes. Yeast. 2004;21(11):947–962. PubMed
Lindroth P, Mopper K. High performance liquid chromatographic determination of subpicomole amounts of amino acids by precolumn fluorescence derivatization with o-phthaldialdehyde. Analytical Chemistry. 1979;51(11):1667–1674.
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