Mitochondrial Cristae Morphology Reflecting Metabolism, Superoxide Formation, Redox Homeostasis, and Pathology

. 2023 Oct ; 39 (10-12) : 635-683. [epub] 20230411

Jazyk angličtina Země Spojené státy americké Médium print-electronic

Typ dokumentu časopisecké články, přehledy, práce podpořená grantem

Perzistentní odkaz   https://www.medvik.cz/link/pmid36793196

Significance: Mitochondrial (mt) reticulum network in the cell possesses amazing ultramorphology of parallel lamellar cristae, formed by the invaginated inner mitochondrial membrane. Its non-invaginated part, the inner boundary membrane (IBM) forms a cylindrical sandwich with the outer mitochondrial membrane (OMM). Crista membranes (CMs) meet IBM at crista junctions (CJs) of mt cristae organizing system (MICOS) complexes connected to OMM sorting and assembly machinery (SAM). Cristae dimensions, shape, and CJs have characteristic patterns for different metabolic regimes, physiological and pathological situations. Recent Advances: Cristae-shaping proteins were characterized, namely rows of ATP-synthase dimers forming the crista lamella edges, MICOS subunits, optic atrophy 1 (OPA1) isoforms and mitochondrial genome maintenance 1 (MGM1) filaments, prohibitins, and others. Detailed cristae ultramorphology changes were imaged by focused-ion beam/scanning electron microscopy. Dynamics of crista lamellae and mobile CJs were demonstrated by nanoscopy in living cells. With tBID-induced apoptosis a single entirely fused cristae reticulum was observed in a mitochondrial spheroid. Critical Issues: The mobility and composition of MICOS, OPA1, and ATP-synthase dimeric rows regulated by post-translational modifications might be exclusively responsible for cristae morphology changes, but ion fluxes across CM and resulting osmotic forces might be also involved. Inevitably, cristae ultramorphology should reflect also mitochondrial redox homeostasis, but details are unknown. Disordered cristae typically reflect higher superoxide formation. Future Directions: To link redox homeostasis to cristae ultramorphology and define markers, recent progress will help in uncovering mechanisms involved in proton-coupled electron transfer via the respiratory chain and in regulation of cristae architecture, leading to structural determination of superoxide formation sites and cristae ultramorphology changes in diseases. Antioxid. Redox Signal. 39, 635-683.

Zobrazit více v PubMed

Aberg F, Zhang Y, Teclebrhan H, et al. . Increases in tissue levels of ubiquinone in association with peroxisome proliferation. Chem Biol Interact 1996;99:205–218. PubMed

Acehan D, Vaz F, Houtkooper RH, et al. . Cardiac and skeletal muscle defects in a mouse model of human Barth syndrome. J Biol Chem 2011;286:899–908. PubMed PMC

Acehan D, Xu Y, Stokes DL, et al. . Comparison of lymphoblast mitochondria from normal subjects and patients with Barth syndrome using electron microscopic tomography. Lab Invest 2007;87:40–48. PubMed PMC

Afri M, Ehrenberg B, Talmon Y, et al. . Active oxygen chemistry within the liposomal bilayer. Part III: Locating vitamin E, ubiquinol and ubiquinone and their derivatives in the lipid bilayer. Chem Phys Lipids 2004;131:107–121. PubMed

Ahmed D, Roy D, Jaworski A, et al. . Differential remodeling of the electron transport chain is required to support TLR3 and TLR4 signaling and cytokine production in macrophages. Sci Rep 2019;9:18801. PubMed PMC

Alexander C, Votruba M, Pesch UE, et al. . OPA1, encoding a dynamin-related GTPase, is mutated in autosomal dominant optic atrophy linked to chromosome 3q28. Nat Genet 2000;26:211–215. PubMed

Allen ME, Pennington ER, Perry JB, et al. . The cardiolipin-binding peptide elamipretide mitigates fragmentation of cristae networks following cardiac ischemia reperfusion in rats. Commun Biol 2020;3:389. PubMed PMC

Amutha B, Gordon DM, Gu Y, et al. . A novel role of Mgm1p, a dynamin-related GTPase, in ATP synthase assembly and cristae formation/maintenance. Biochem J 2004;381:19–23. PubMed PMC

Anand R, Kondadi AK, Meisterknecht J, et al. . MIC26 and MIC27 cooperate to regulate cardiolipin levels and the landscape of OXPHOS complexes. Life Sci Alliance 2020;3:e202000711. PubMed PMC

Anand R, Wai T, Baker MJ, et al. . The i-AAA protease YME1L and OMA1 cleave OPA1 to balance mitochondrial fusion and fission. J Cell Biol 2014;204:919–929. PubMed PMC

Anastasia I, Ilacqua N, Raimondi A, et al. . Mitochondria-rough-ER contacts in the liver regulate systemic lipid homeostasis. Cell Rep 2021;34:108873. PubMed

Appelhans T, Busch KB. Dynamic imaging of mitochondrial membrane proteins in specific sub-organelle membrane locations. Biophys Rev 2017;9:345–352. PubMed PMC

Appelhoff RJ, Tian YM, Raval RR, et al. . Differential function of the prolyl hydroxylases PHD1, PHD2, and PHD3 in the regulation of hypoxia-inducible factor. J Biol Chem 2004;279:38458–38465. PubMed

Arguello T, Peralta S, Antonicka H, et al. . ATAD3A has a scaffolding role regulating mitochondria inner membrane structure and protein assembly. Cell Rep 2021;37:110139. PubMed PMC

Arismendi-Morillo G. Electron microscopy morphology of the mitochondrial network in human cancer. Int J Biochem Cell Biol 2009;41:2062–2068. PubMed

Arismendi-Morillo GJ, Castellano-Ramirez AV. Ultrastructural mitochondrial pathology in human astrocytic tumors: Potentials implications pro-therapeutics strategies. J Electron Microsc (Tokyo) 2008;57:33–39. PubMed

Ausili A, Torrecillas A, Aranda F, et al. . Redox state of coenzyme Q10 determines its membrane localization. J Phys Chem B 2008;112:12696–12702. PubMed

Austin S, Tavakoli M, Pfeiffer C, et al. . LETM1-mediated K+ and Na+ homeostasis regulates mitochondrial Ca2+ efflux. Front Physiol 2017;8:839. PubMed PMC

Bajzikova M, Kovarova J, Coelho AR, et al. . Reactivation of dihydroorotate dehydrogenase-driven pyrimidine biosynthesis restores tumor growth of respiration-deficient cancer cells. Cell Metab 2019;29:399..e10–416.e10. PubMed PMC

Baker N, Patel J, Khacho, M. Linking mitochondrial dynamics, cristae remodeling and supercomplex formation: How mitochondrial structure can regulate bioenergetics. Mitochondrion 2019;49:259–268. PubMed

Banati RB, Egensperger R, Maassen A, et al. . Mitochondria in activated microglia in vitro. J Neurocytol 2004;33:535–541. PubMed

Bandara AB, Drake JC, Brown DA. Complex II subunit SDHD is critical for cell growth and metabolism, which can be partially restored with a synthetic ubiquinone analog. BMC Mol Cell Biol 2021;22:35. PubMed PMC

Banerjee R, Purhonen J, Kallijärvi J. The mitochondrial coenzyme Q junction and complex III: Biochemistry and pathophysiology. FEBS J 2022;289(22):6936–6958. PubMed

Barbosa MR, Sampaio IH, Teodoro BG, et al. . Hydrogen peroxide production regulates the mitochondrial function in insulin resistant muscle cells: Effect of catalase overexpression. Biochim Biophys Acta 2013;1832:1591–1604. PubMed

Barbot M, Jans DC, Schulz C, et al. . Mic10 oligomerizes to bend mitochondrial inner membranes at cristae junctions. Cell Metab 2015;21:756–763. PubMed

Barrera M, Koob S, Dikov D, et al. . OPA1 functionally interacts with MIC60 but is dispensable for crista junction formation. FEBS Lett 2016;590:3309–3322. PubMed

Bazil JN, Pannala VR, Dash RK, et al. . Determining the origins of superoxide and hydrogen peroxide in the mammalian NADH:ubiquinone oxidoreductase. Free Radic Biol Med 2014;77:121–129. PubMed PMC

Bean C, Audano M, Varanita T, et al. . The mitochondrial protein Opa1 promotes adipocyte browning that is dependent on urea cycle metabolites. Nat Metab 2021;3:1633–1647. PubMed

Bell EL, Klimova TA, Eisenbart J, et al. . The Qo site of the mitochondrial complex III is required for the transduction of hypoxic signaling via reactive oxygen species production. J Cell Biol 2007;177:1029–1036. PubMed PMC

Bellance N, Lestienne P, Rossignol R. Mitochondria: From bioenergetics to the metabolic regulation of carcinogenesis. Front Biosci (Landmark Ed) 2009;14:4015–4034. PubMed

Benincá C, Zanette V, Brischigliaro M, et al. . Mutation in the MICOS subunit gene APOO (MIC26) associated with an X-linked recessive mitochondrial myopathy, lactic acidosis, cognitive impairment and autistic features. J Med Genet 2021;58:155–167. PubMed PMC

Bereiter-Hahn J, Vöth M, Mai S, et al. . Structural implications of mitochondrial dynamics. Biotechnol J 2008;3:765–780. PubMed

Bernardi P, Carraro M, Lippe G. The mitochondrial permeability transition: Recent progress and open questions. FEBS J 2022;289(22):7051–7074. PubMed PMC

Berndtsson J, Aufschnaiter A, Rathore S, et al. . Respiratory supercomplexes enhance electron transport by decreasing cytochrome c diffusion distance. EMBO Rep 2020;21:e51015. PubMed PMC

Bertholet AM, Chouchani ET, Kazak L, et al. . H(+) transport is an integral function of the mitochondrial ADP/ATP carrier. Nature 2019;571:515–520. PubMed PMC

Bezawork-Geleta A, Rohlena J, Dong L, et al. . Mitochondrial complex II: At the crossroads. Trends Biochem Sci 2017;42:312–325. PubMed PMC

Bione S, D'Adamo P, Maestrini E, et al. . A novel X-linked gene, G4.5. is responsible for Barth syndrome. Nat Genet 1996;12:385–389. PubMed

Birrell JA, Hirst J. Investigation of NADH binding, hydride transfer, and NAD(+) dissociation during NADH oxidation by mitochondrial complex I using modified nicotinamide nucleotides. Biochemistry 2013;52:4048–4055. PubMed PMC

Bleier L, Dröse S. Superoxide generation by complex III: From mechanistic rationales to functional consequences. Biochim Biophys– Acta 2013;1827:1320–1331. PubMed

Blum TB, Hahn A, Meier T, et al. . Dimers of mitochondrial ATP synthase induce membrane curvature and self-assemble into rows. Proc Natl Acad Sci U S A 2019;116:4250–4255. PubMed PMC

Bocca C, Kane MS, Veyrat-Durebex C, et al. . The metabolomic bioenergetic signature of Opa1-disrupted mouse embryonic fibroblasts highlights aspartate deficiency. Sci Rep 2018;8:11528. PubMed PMC

Bohnert M, Wenz LS, Zerbes RM, et al. . Role of mitochondrial inner membrane organizing system in protein biogenesis of the mitochondrial outer membrane. Mol Biol Cell 2012;23:3948–3956. PubMed PMC

Bohnert M, Zerbes RM, Davies KM, et al. . Central role of Mic10 in the mitochondrial contact site and cristae organizing system. Cell Metab 2015;21:747–755. PubMed

Bonjour K, Palazzi C, Silva TP, et al. . Mitochondrial population in mouse eosinophils: Ultrastructural dynamics in cell differentiation and inflammatory diseases. Front Cell Dev Biol 2022;10:836755. PubMed PMC

Borecky J, Jezek P, Siemen D. 108-pS channel in brown fat mitochondria might Be identical to the inner membrane anion channel. J Biol Chem 1997;272:19282–19289. PubMed

Bossy B, Petrilli A, Klinglmayr E, et al. . S-Nitrosylation of DRP1 does not affect enzymatic activity and is not specific to Alzheimer's disease. J Alzheimers Dis 2010;20(Suppl 2):S513–S526. PubMed PMC

Bou-Teen D, Fernandez-Sanz C, Miro-Casas E, et al. . Defective dimerization of FoF1-ATP synthase secondary to glycation favors mitochondrial energy deficiency in cardiomyocytes during aging. Aging Cell 2022;21:e13564. PubMed PMC

Boukalova S, Hubackova S, Milosevic M, et al. . Dihydroorotate dehydrogenase in oxidative phosphorylation and cancer. Biochim Biophys Acta Mol Basis Dis 2020;1866:165759. PubMed

Boveris A, Chance B. The mitochondrial generation of hydrogen peroxide. General properties and effect of hyperbaric oxygen. Biochem J 1973;134:707–716. PubMed PMC

Brand MD. Mitochondrial generation of superoxide and hydrogen peroxide as the source of mitochondrial redox signaling. Free Radic Biol Med 2016;100:14–31. PubMed

Brand MD. Riding the tiger—Physiological and pathological effects of superoxide and hydrogen peroxide generated in the mitochondrial matrix. Crit Rev Biochem Mol Biol 2020;55:592–661. PubMed

Brand MD, Goncalves RLS, Orr AL, et al. . Suppressors of superoxide-H2O2 production at site IQ of mitochondrial complex I protect against stem cell hyperplasia and ischemia-reperfusion injury. Cell Metab 2016;24:582–592. PubMed PMC

Bridges HR, Fedor JG, Blaza JN, et al. . Structure of inhibitor-bound mammalian complex I. Nat Commun 2020;11:5261. PubMed PMC

Brierley GP, Jurkowitz MS, Farooqui T, et al. . K+/H+ antiport in heart mitochondria. J Biol Chem 1984;259:14672–14678. PubMed

Briggs KJ, Koivunen P, Cao S, et al. . Paracrine induction of HIF by glutamate in breast cancer: EglN1 senses cysteine. Cell 2016;166:126–139. PubMed PMC

Brocato J, Chervona Y, Costa M. Molecular responses to hypoxia-inducible factor 1alpha and beyond. Mol Pharmacol 2014;85:651–657. PubMed PMC

Brunelle JK, Bell EL, Quesada NM, et al. . Oxygen sensing requires mitochondrial ROS but not oxidative phosphorylation. Cell Metab 2005;1:409–414. PubMed

Brzezinski P, Moe A, Ädelroth P. Structure and mechanism of respiratory III-IV supercomplexes in bioenergetic membranes. Chem Rev 2021;121:9644–9673. PubMed PMC

Bugger H, Chen D, Riehle C, et al. . Tissue-specific remodeling of the mitochondrial proteome in type 1 diabetic akita mice. Diabetes 2009;58:1986–1997. PubMed PMC

Bujnowicz Ł, Borek A, Kuleta P, et al. . Suppression of superoxide production by a spin-spin coupling between semiquinone and the Rieske cluster in cytochrome bc1. FEBS Lett 2019;593:3–12. PubMed

Bunik VI. Redox-driven signaling: 2-Oxo acid dehydrogenase complexes as sensors and transmitters of metabolic imbalance. Antioxid Redox Signal 2019;30:1911–1947. PubMed

Bunik VI, Brand MD. Generation of superoxide and hydrogen peroxide by side reactions of mitochondrial 2-oxoacid dehydrogenase complexes in isolation and in cells. Biol Chem 2018;399:407–420. PubMed

Burger N, Logan A, Prime TA, et al. . A sensitive mass spectrometric assay for mitochondrial CoQ pool redox state in vivo. Free Radic Biol Med 2020;147:37–47. PubMed PMC

Busch KB. Inner mitochondrial membrane compartmentalization: Dynamics across scales. Int J Biochem Cell Biol 2020;120:105694. PubMed

Cabezón E, Arechaga I, Jonathan P, et al. . Dimerization of bovine F1-ATPase by binding the inhibitor protein, IF1. J Biol Chem 2000;275:28353–28355. PubMed

Cannino G, Urbani A, Gaspari M, et al. . The mitochondrial chaperone TRAP1 regulates F-ATP synthase channel formation. Cell Death Differ 2022;29(12):2335–2346. PubMed PMC

Cartes-Saavedra B, Macuada J, Lagos D, et al. . OPA1 modulates mitochondrial Ca2+ uptake through ER-mitochondria coupling. Front Cell Dev Biol 2021;9:774108. PubMed PMC

Chai RR, Chen GW, Shi HJ, et al. . Prohibitin involvement in the generation of mitochondrial superoxide at complex I in human sperm. J Cell Mol Med 2017;21:121–129. PubMed PMC

Chan CK, Singharoy A, Tajkhorshid E. Anionic lipids confine cytochrome c2 to the surface of bioenergetic membranes without compromising its interaction with redox partners. Biochemistry 2022;61:385–397. PubMed PMC

Chandel NS, Maltepe E, Goldwasser E, et al. . Mitochondrial reactive oxygen species trigger hypoxia-induced transcription. Proc Natl Acad Sci U S A 1998;95:11715–11720. PubMed PMC

Chandel NS, Mcclintock DS, Feliciano CE, et al. . Reactive oxygen species generated at mitochondrial complex III stabilize hypoxia-inducible factor-1alpha during hypoxia: A mechanism of O2 sensing. J Biol Chem 2000;275:25130–25138. PubMed

Chapman J, Ng YS, Nicholls TJ. The maintenance of mitochondrial DNA integrity and dynamics by mitochondrial membranes. Life (Basel) 2020;10:164. PubMed PMC

Checchetto V, Leanza L, De Stefani D, et al. . Mitochondrial K+ channels and their implications for disease mechanisms. Pharmacol Ther 2021;227:107874. PubMed

Chiang S, Braidy N, Maleki S, et al. . Mechanisms of impaired mitochondrial homeostasis and NAD+ metabolism in a model of mitochondrial heart disease exhibiting redox active iron accumulation. Redox Biol 2021;46:102038. PubMed PMC

Chinta SJ, Rane A, Yadava N, et al. . Reactive oxygen species regulation by AIF- and complex I-depleted brain mitochondria. Free Radic Biol Med 2009;46:939–947. PubMed PMC

Chouchani ET, Pell VR, Gaude E, et al. . Ischaemic accumulation of succinate controls reperfusion injury through mitochondrial ROS. Nature 2014;515:431–435. PubMed PMC

Chowdhury R, Flashman E, Mecinovic J, et al. . Studies on the reaction of nitric oxide with the hypoxia-inducible factor prolyl hydroxylase domain 2 (EGLN1). J Mol Biol 2011;410:268–279. PubMed

Cipolat S, Rudka T, Hartmann D, et al. . Mitochondrial rhomboid PARL regulates cytochrome c release during apoptosis via OPA1-dependent cristae remodeling. Cell 2006;126:163–175. PubMed

Civiletto G, Varanita T, Cerutti R, et al. . Opa1 overexpression ameliorates the phenotype of two mitochondrial disease mouse models. Cell Metab 2015;21:845–854. PubMed PMC

Cogliati S, Enriquez JA, Scorrano L. Mitochondrial cristae: Where beauty meets functionality. Trends Biochem Sci 2016;41:261–273. PubMed

Cogliati S, Frezza C, Soriano ME, et al. . Mitochondrial cristae shape determines respiratory chain supercomplexes assembly and respiratory efficiency. Cell 2013;155:160–171. PubMed PMC

Colina-Tenorio L, Horten P, Pfanner N, et al. . Shaping the mitochondrial inner membrane in health and disease. J Intern Med 2020;287:645–664. PubMed

Collins Y, Chouchani ET, James AM, et al. . Mitochondrial redox signaling at a glance. J Cell Sci 2012;125:801–806. PubMed

Comito G, Calvani M, Giannoni E, et al. . HIF-1alpha stabilization by mitochondrial ROS promotes Met-dependent invasive growth and vasculogenic mimicry in melanoma cells. Free Radic Biol Med 2011;51:893–904. PubMed

Corrado M, Samardžić D, Giacomello M, et al. . Deletion of the mitochondria-shaping protein Opa1 during early thymocyte maturation impacts mature memory T cell metabolism. Cell Death Differ 2021;28:2194–2206. PubMed PMC

Costa AD, Garlid KD. Intramitochondrial signaling: Interactions among mitoKATP, PKCepsilon, ROS, and MPT. Am J Physiol Heart Circ Physiol 2008;295:H874–H882. PubMed PMC

Costa AD, Quinlan CL, Andrukhiv A, et al. . The direct physiological effects of mitoK(ATP) opening on heart mitochondria. Am J Physiol Heart Circ Physiol 2006;290:H406–H415. PubMed

Dambrova M, Zuurbier CJ, Borutaite V, et al. . Energy substrate metabolism and mitochondrial oxidative stress in cardiac ischemia/reperfusion injury. Free Radic Biol Med 2021;165:24–37. PubMed

Darshi M, Mendiola VL, Mackey MR, et al. . ChChd3, an inner mitochondrial membrane protein, is essential for maintaining crista integrity and mitochondrial function. J Biol Chem 2011;286:2918–2932. PubMed PMC

Daum B, Walter A, Horst A, et al. . Age-dependent dissociation of ATP synthase dimers and loss of inner-membrane cristae in mitochondria. Proc Natl Acad Sci U S A 2013;110:15301–15306. PubMed PMC

Davies KM, Anselmi C, Wittig I, et al. . Structure of the yeast F1Fo-ATP synthase dimer and its role in shaping the mitochondrial cristae. Proc Natl Acad Sci U S A 2012;109:13602–13607. PubMed PMC

Davies KM, Strauss M, Daum B, et al. . Macromolecular organization of ATP synthase and complex I in whole mitochondria. Proc Natl Acad Sci U S A 2011;108:14121–14126. PubMed PMC

De Rasmo D, Ferretta A, Russo S, et al. . PBMC of multiple sclerosis patients show deregulation of OPA1 processing associated with increased ROS and PHB2 protein levels. Biomedicines 2020;8:85. PubMed PMC

De Stefani D, Rizzuto R, Pozzan T. Enjoy the trip: Calcium in mitochondria back and forth. Annu Rev Biochem 2016;85:161–192. PubMed

Delettre C, Lenaers G, Griffoin JM, et al. . Nuclear gene OPA1, encoding a mitochondrial dynamin-related protein, is mutated in dominant optic atrophy. Nat Genet 2000;26:207–210. PubMed

Diebold L, Chandel NS. Mitochondrial ROS regulation of proliferating cells. Free Radic Biol Med 2016;100:86–93. PubMed

Ding WX, Li M, Biazik JM, et al. . Electron microscopic analysis of a spherical mitochondrial structure. J Biol Chem 2012;287:42373–42378. PubMed PMC

Dlasková A, Engstová H, Špaček T, et al. . 3D super-resolution microscopy reflects mitochondrial cristae alternations and mtDNA nucleoid size and distribution. Biochim Biophys Acta Bioenerg 2018;1859:829–844. PubMed

Dlasková A, Hlavatá L, Ježek P. Oxidative stress caused by blocking of mitochondrial complex I H+ pumping as a link in aging/disease vicious cycle. Int J Biochem Cell Biol 2008;40:1792–1805. PubMed

Dlasková A, Spacek T, Engstova H, et al. . Mitochondrial cristae narrowing upon higher 2-oxoglutarate load. Biochim Biophys Acta Bioenerg 2019;1860:659–678. PubMed

Dlasková A, Špaček T, Šantorová J, et al. . 4Pi microscopy reveals an impaired three-dimensional mitochondrial network of pancreatic islet β-cells, an experimental model of type-2 diabetes. Biochim Biophys– Acta 2010;1797:1327–1341. PubMed

Domondon M, Polina I, Nikiforova AB, et al. . Renal glomerular mitochondria function in salt-sensitive hypertension. Front Physiol 2019;10:1588. PubMed PMC

Dudkina NV, Oostergetel GT, Lewejohann D, et al. . Row-like organization of ATP synthase in intact mitochondria determined by cryo-electron tomography. Biochim Biophys Acta 2010;1797:272–277. PubMed

Eisner V, Cupo RR, Gao E, et al. . Mitochondrial fusion dynamics is robust in the heart and depends on calcium oscillations and contractile activity. Proc Natl Acad Sci U S A 2017;114:E859–E868. PubMed PMC

Elachouri G, Vidoni S, Zanna C, et al. . OPA1 links human mitochondrial genome maintenance to mtDNA replication and distribution. Genome Res 2011;21:12–20. PubMed PMC

Elumalai S, Karunakaran U, Moon JS, et al. . High glucose-induced Prdx3 acetylation contributes to glucotoxicity in pancreatic β-cells: Prevention by Teneligliptin. Free Radic Biol Med 2020;160:618–629. PubMed

Eriksson EK, Agmo Hernández V, Edwards K. Effect of ubiquinone-10 on the stability of biomimetic membranes of relevance for the inner mitochondrial membrane. Biochim Biophys Acta Biomembr 2018;1860:1205–1215. PubMed

Ernster L, Schatz G. Mitochondria: A historical review. J Cell Biol 1981;91:227s–255s. PubMed PMC

Eydt K, Davies KM, Behrendt C, et al. . Cristae architecture is determined by an interplay of the MICOS complex and the F1FO ATP synthase via Mic27 and Mic10. Microb Cell 2017;4:259–272. PubMed PMC

Faelber K, Dietrich L, Noel JK, et al. . Structure and assembly of the mitochondrial membrane remodelling GTPase Mgm1. Nature 2019;571:429–433. PubMed PMC

Fallaize D, Chin LS, Li L. Differential submitochondrial localization of PINK1 as a molecular switch for mediating distinct mitochondrial signaling pathways. Cell Signal 2015;27:2543–2554. PubMed PMC

Fang J, Wong HS, Brand MD. Production of superoxide and hydrogen peroxide in the mitochondrial matrix is dominated by site IQ of complex I in diverse cell lines. Redox Biol 2020;37:101722. PubMed PMC

Fato R, Battino M, Degli Esposti M, et al. . Determination of partition and lateral diffusion coefficients of ubiquinones by fluorescence quenching of n-(9-anthroyloxy)stearic acids in phospholipid vesicles and mitochondrial membranes. Biochemistry 1986;25:3378–3390. PubMed

Favaro G, Romanello V, Varanita T, et al. . DRP1-mediated mitochondrial shape controls calcium homeostasis and muscle mass. Nat Commun 2019;10:2576. PubMed PMC

Fedor JG, Hirst J. Mitochondrial supercomplexes do not enhance catalysis by quinone channeling. Cell Metab 2018;28:525..e4–531.e4. PubMed PMC

Fedor JG, Jones AJY, Di Luca A, et al. . Correlating kinetic and structural data on ubiquinone binding and reduction by respiratory complex I. Proc Natl Acad Sci U S A 2017;114:12737–12742. PubMed PMC

Fedorenko A, Lishko PV, Kirichok Y. Mechanism of fatty-acid-dependent Ucp1 uncoupling in brown fat mitochondria. Cell 2012;151:400–413. PubMed PMC

Feldmann G, Haouzi D, Moreau A, et al. . Opening of the mitochondrial permeability transition pore causes matrix expansion and outer membrane rupture in Fas-mediated hepatic apoptosis in mice. Hepatology 2000;31:674–683. PubMed

Feng L, Wang S, Chen F, et al. . Hepatic knockdown of endothelin type A receptor (ETAR) ameliorates hepatic insulin resistance and hyperglycemia through suppressing p66Shc-mediated mitochondrial fragmentation in high-fat diet-fed mice. Diabetes Metab Syndr Obes 2021;14:963–981. PubMed PMC

Fernandez-Vizarra E, Zeviani M. Mitochondrial complex III Rieske Fe-S protein processing and assembly. Cell Cycle 2018;17:681–687. PubMed PMC

Fernandez-Vizarra E, Zeviani M. Mitochondrial disorders of the OXPHOS system. FEBS Lett 2021;595:1062–1106. PubMed

Fiedorczuk K, Letts JA, Degliesposti G, et al. . Atomic structure of the entire mammalian mitochondrial complex I. Nature 2016;538:406–410. PubMed PMC

Fiolka R, Shao L, Rego EH, et al. . Time-lapse two-color 3D imaging of live cells with doubled resolution using structured illumination. Proc Natl Acad Sci U S A 2012;109:5311–5315. PubMed PMC

Francisco JA, Juan CG-F. The interaction of ubiquinone-10 and ubiquinol-10 with phospholipid bilayers. A study using differential scanning calorimetry and turbidity measurements. Biochim Biophys– Acta Biomembr 1985;820:19–26.

Frey TG, Mannella CA. The internal structure of mitochondria. Trends Biochem Sci 2000;25:319–324. PubMed

Frey TG, Renken CW, Perkins GA. Insight into mitochondrial structure and function from electron tomography. Biochim Biophys Acta 2002;1555:196–203. PubMed

Frezza C, Cipolat S, Martins De Brito O, et al. . OPA1 controls apoptotic cristae remodeling independently from mitochondrial fusion. Cell 2006;126:177–189. PubMed

Fuhrmann DC, Brune B. Mitochondrial composition and function under the control of hypoxia. Redox Biol 2017;12:208–215. PubMed PMC

Galassi VV, Arantes GM. Partition, orientation and mobility of ubiquinones in a lipid bilayer. Biochim Biophys Acta 2015;1847:1560–1573. PubMed

Galemou Yoga E, Haapanen O, Wittig I, et al. . Mutations in a conserved loop in the PSST subunit of respiratory complex I affect ubiquinone binding and dynamics. Biochim Biophys Acta Bioenerg 2019;1860:573–581. PubMed

Galimov ER, Chernyak BV, Sidorenko AS, et al. . Prooxidant properties of p66shc are mediated by mitochondria in human cells. PLoS One 2014;9:e86521. PubMed PMC

Gandhi CR, Chaillet JR, Nalesnik MA, et al. . Liver-specific deletion of augmenter of liver regeneration accelerates development of steatohepatitis and hepatocellular carcinoma in mice. Gastroenterology 2015;148:379..e4–391.e4. PubMed PMC

García ML, Fernández A, Solas MT. Mitochondria, motor neurons and aging. J Neurol Sci 2013;330:18–26. PubMed

Garlid AO, Jaburek M, Jacobs JP, et al. . Mitochondrial reactive oxygen species: Which ROS signals cardioprotection? Am J Physiol Heart Circ Physiol 2013;305:H960–H968. PubMed PMC

Garlid KD, Costa AD, Quinlan CL, et al. . Cardioprotective signaling to mitochondria. J Mol Cell Cardiol 2009;46:858–866. PubMed PMC

Garlid KD, Paucek P. Mitochondrial potassi©ransport: The K(+) cycle. Biochim Biophys Acta 2003;1606:23–41. PubMed

Garone C, Pietra A, Nesci S. From the structural and (dys)function of ATP synthase to deficiency in age-related diseases. Life (Basel) 2022;12:401. PubMed PMC

Gasanoff ES, Yaguzhinsky LS, Garab G. Cardiolipin, non-bilayer structures and mitochondrial bioenergetics: relevance to cardiovascular disease. Cells 2021;10:1721. PubMed PMC

Genin EC, Bannwarth S, Ropert B, et al. . CHCHD10 and SLP2 control the stability of the PHB complex: A key factor for motor neuron viability. Brain 2022;145(10):3415–3430. PubMed

Germain M, Mathai JP, Mcbride HM, et al. . Endoplasmic reticulum BIK initiates DRP1-regulated remodelling of mitochondrial cristae during apoptosis. EMBO J 2005;24:1546–1556. PubMed PMC

Giacomello M, Pyakurel A, Glytsou C, et al. . The cell biology of mitochondrial membrane dynamics. Nat Rev Mol Cell Biol 2020;21:204–224. PubMed

Giorgio M, Migliaccio E, Orsini F, et al. . Electron transfer between cytochrome c and p66Shc generates reactive oxygen species that trigger mitochondrial apoptosis. Cell 2005;122:221–233. PubMed

Giorgio V, Fogolari F, Lippe, G, et al. . OSCP subunit of mitochondrial ATP synthase: Role in regulation of enzyme function and of its transition to a pore. Br J Pharmacol 2019;176:4247–4257. PubMed PMC

Girardi E, Agrimi G, Goldmann U, et al. . Epistasis-driven identification of SLC25A51 as a regulator of human mitochondrial NAD import. Nat Commun 2020;11:6145. PubMed PMC

Glancy B, Hartnell LM, Malide D, et al. . Mitochondrial reticulum for cellular energy distribution in muscle. Nature 2015;523:617–620. PubMed PMC

Glytsou C, Calvo E, Cogliati S, et al. . Optic atrophy 1 is epistatic to the core MICOS component MIC60 in mitochondrial cristae shape control. Cell Rep 2016;17:3024–3034. PubMed PMC

Gödiker J, Grüneberg M, Duchesne I, et al. . QIL1-dependent assembly of MICOS complex-lethal mutation in C19ORF70 resulting in liver disease and severe neurological retardation. J Hum Genet 2018;63:707–716. PubMed

Gomes LC, DI Benedetto G, Scorrano L. During autophagy mitochondria elongate, are spared from degradation and sustain cell viability. Nat Cell Biol 2011;13:589–598. PubMed PMC

Goncalves RL, Quinlan CL, Perevoshchikova IV, et al. . Sites of superoxide and hydrogen peroxide production by muscle mitochondria assessed ex vivo under conditions mimicking rest and exercise. J Biol Chem 2015;290:209–227. PubMed PMC

Goncalves RLS, Watson MA, Wong HS, et al. . The use of site-specific suppressors to measure the relative contributions of different mitochondrial sites to skeletal muscle superoxide and hydrogen peroxide production. Redox Biol 2019;28:101341. PubMed PMC

Gorman GS, Chinnery PF, Dimauro S, et al. . Mitochondrial diseases. Nat Rev Dis Primers 2016;2:16080. PubMed

Gottschalk B, Klec C, Leitinger G, et al. . MICU1 controls cristae junction and spatially anchors mitochondrial Ca2+ uniporter complex. Nat Commun 2019;10:3732. PubMed PMC

Graham TR, Kozlov MM. Interplay of proteins and lipids in generating membrane curvature. Curr Opin Cell Biol 2010;22:430–436. PubMed PMC

Grba DN, Hirst J. Mitochondrial complex I structure reveals ordered water molecules for catalysis and proton translocation. Nat Struct Mol Biol 2020;27:892–900. PubMed PMC

Grivennikova VG, Kozlovsky VS, Vinogradov AD. Respiratory complex II: ROS production and the kinetics of ubiquinone reduction. Biochim Biophys Acta Bioenerg 2017;1858:109–117. PubMed

Gu J, Zhang L, Zong S, et al. . Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1. Science 2019;364:1068–1075. PubMed

Guarás A, Perales-Clemente E, Calvo E, et al. . The CoQH2/CoQ ratio serves as a sensor of respiratory chain efficiency. Cell Rep 2016;15:197–209. PubMed

Guo H, Bueler SA, Rubinstein JL. Atomic model for the dimeric F(O) region of mitochondrial ATP synthase. Science 2017;358:936–940. PubMed PMC

Gupte S, Wu ES, Hoechli L, et al. . Relationship between lateral diffusion, collision frequency, and electron transfer of mitochondrial inner membrane oxidation-reduction components. Proc Natl Acad Sci U S A 1984;81:2606–2610. PubMed PMC

Guzy RD, Hoyos B, Robin E, et al. . Mitochondrial complex III is required for hypoxia-induced ROS production and cellular oxygen sensing. Cell Metab 2005;1:401–408. PubMed

Hackenbrock CR. Ultrastructural bases for metabolically linked mechanical activity in mitochondria. I. Reversible ultrastructural changes with change in metabolic steady state in isolated liver mitochondria. J Cell Biol 1966;30:269–297. PubMed PMC

Hackenbrock CR. Chemical and physical fixation of isolated mitochondria in low-energy and high-energy states. Proc Natl Acad Sci U S A 1968;61:598–605. PubMed PMC

Hadrava Vanova K, Kraus M, Neuzil J, et al. . Mitochondrial complex II and reactive oxygen species in disease and therapy. Redox Rep 2020;25:26–32. PubMed PMC

Harel T, Yoon WH, Garone C, et al. . Recurrent de novo and biallelic variation of ATAD3A, encoding a mitochondrial membrane protein, results in distinct neurological syndromes. Am J Hum Genet 2016;99:831–845. PubMed PMC

Harner M, Körner C, Walther D, et al. . The mitochondrial contact site complex, a determinant of mitochondrial architecture. EMBO J 2011;30:4356–4370. PubMed PMC

Harner ME, Unger AK, Izawa T, et al. . Aim24 and MICOS modulate respiratory function, tafazzin-related cardiolipin modification and mitochondrial architecture. Elife 2014;3:e01684. PubMed PMC

Hauss T, Dante S, Haines TH, et al. . Localization of coenzyme Q10 in the center of a deuterated lipid membrane by neutron diffraction. Biochim Biophys Acta 2005;1710:57–62. PubMed

He J, Ford HC, Carroll J, et al. . Assembly of the membrane domain of ATP synthase in human mitochondria. Proc Natl Acad Sci U S A 2018;115:2988–2993. PubMed PMC

Hering T, Kojer K, Birth N, et al. . Mitochondrial cristae remodelling is associated with disrupted OPA1 oligomerisation in the Huntington's disease R6/2 fragment model. Exp Neurol 2017;288:167–175. PubMed

Herkenne S, Ek O, Zamberlan M, et al. . Developmental and tumor angiogenesis requires the mitochondria-shaping protein Opa1. Cell Metab 2020;31:987–1003.e8. PubMed

Herkenne S, Scorrano L. OPA1, a new mitochondrial target in cancer therapy. Aging (Albany NY) 2020;12:20931–20933. PubMed PMC

Hernansanz-Agustín P, Choya-Foces C, Carregal-Romero S, et al. . Na+ controls hypoxic signaling by the mitochondrial respiratory chain. Nature 2020;586:287–291. PubMed PMC

Hernansanz-Agustin P, Ramos E, Navarro E, et al. . Mitochondrial complex I deactivation is related to superoxide production in acute hypoxia. Redox Biol 2017;12:1040–1051. PubMed PMC

Hessenberger M, Zerbes RM, Rampelt H, et al. . Regulated membrane remodeling by Mic60 controls formation of mitochondrial crista junctions. Nat Commun 2017;8:15258. PubMed PMC

Hewitson KS, Lienard BM, Mcdonough MA, et al. . Structural and mechanistic studies on the inhibition of the hypoxia-inducible transcription factor hydroxylases by tricarboxylic acid cycle intermediates. J Biol Chem 2007;282:3293–3301. PubMed

Hirst J, King MS, Pryde KR. The production of reactive oxygen species by complex I. Biochem Soc Trans 2008;36:976–980. PubMed

Hirst J, Roessler MM. Energy conversion, redox catalysis and generation of reactive oxygen species by respiratory complex I. Biochim Biophys Acta 2016;1857:872–883. PubMed PMC

Höhr AI, Straub SP, Warscheid B, et al. . Assembly of β-barrel proteins in the mitochondrial outer membrane. Biochim Biophys Acta 2015;1853:74–88. PubMed

Homma T, Kobayashi S, Sato H, et al. . Superoxide produced by mitochondrial complex III plays a pivotal role in the execution of ferroptosis induced by cysteine starvation. Arch Biochem Biophys 2021;700:108775. PubMed

Hong SW, Lee J, Kwon H, et al. . Deficiency of sphingosine-1-phosphate reduces the expression of prohibitin and causes β-cell impairment via mitochondrial dysregulation. Endocrinol Metab (Seoul) 2018;33:403–412. PubMed PMC

Horiguchi M, Hata S, Tsurudome Y, et al. . Characterizing the degeneration of nuclear membrane and mitochondria of adipose-derived mesenchymal stem cells from patients with type II diabetes. J Cell Mol Med 2021;25:4298–4306. PubMed PMC

Hovius R, Lambrechts H, Nicolay K, et al. . Improved methods to isolate and subfractionate rat liver mitochondria. Lipid composition of the inner and outer membrane. Biochim Biophys Acta 1990;1021:217–226. PubMed

Howarth FC, Qureshi MA, Sobhy ZH, et al. . Structural lesions and changing pattern of expression of genes encoding cardiac muscle proteins are associated with ventricular myocyte dysfunction in type 2 diabetic Goto-Kakizaki rats fed a high-fat diet. Exp Physiol 2011;96:765–777. PubMed

Hoyo J, Guaus E, Torrent-Burgués, J. Tuning ubiquinone position in biomimetic monolayer membranes. Eur Phys J E Soft Matter 2017;40:62. PubMed

Huang TT, Sun WJ, Liu HY, et al. . p66Shc-mediated oxidative stress is involved in gestational diabetes mellitus. World J Diabetes 2021;12:1894–1907. PubMed PMC

Huang X, Fan J, Li L, et al. . Fast, long-term, super-resolution imaging with Hessian structured illumination microscopy. Nat Biotechnol 2018;36:451–459. PubMed

Husen P, Nielsen C, Martino CF, et al. . Molecular oxygen binding in the mitochondrial electron transfer flavoprotein. J Chem Inf Model 2019;59:4868–4879. PubMed

Huynh TYL, Zareba I, Baszanowska W, et al. . Understanding the role of key amino acids in regulation of proline dehydrogenase/proline oxidase (prodh/pox)-dependent apoptosis/autophagy as an approach to targeted cancer therapy. Mol Cell Biochem 2020;466:35–44. PubMed PMC

Ikon N, Ryan RO. Cardiolipin and mitochondrial cristae organization. Biochim Biophys Acta Biomembr 2017;1859:1156–1163. PubMed PMC

Iovine JC, Claypool SM, Alder NN. Mitochondrial compartmentalization: Emerging themes in structure and function. Trends Biochem Sci 2021;46:902–917. PubMed PMC

Ishikawa K, Takenaga K, Akimoto M, et al. . ROS-generating mitochondrial DNA mutations can regulate tumor cell metastasis. Science 2008;320:661–664. PubMed

Jabůrek M, Costa AD, Burton JR, et al. . Mitochondrial PKC epsilon and mitochondrial ATP-sensitive K+ channel copurify and coreconstitute to form a functioning signaling module in proteoliposomes. Circ Res 2006;99:878–883. PubMed

Jabůrek M, Průchová P, Holendová B, et al. . Antioxidant synergy of mitochondrial phospholipase PNPLA8/iPLA2γ with fatty acid-conducting SLC25 gene family transporters. Antioxidants (Basel) 2021;10:678. PubMed PMC

Jabůrek M, Yarov-Yarovoy V, Paucek P, et al. . State-dependent inhibition of the mitochondrial KATP channel by glyburide and 5-hydroxydecanoate. J Biol Chem 1998;273:13578–13582. PubMed

James AM, Sharpley MS, Manas AR, et al. . Interaction of the mitochondria-targeted antioxidant MitoQ with phospholipid bilayers and ubiquinone oxidoreductases. J Biol Chem 2007;282:14708–14718. PubMed

Jans DC, Wurm CA, Riedel D, et al. . STED super-resolution microscopy reveals an array of MINOS clusters along human mitochondria. Proc Natl Acad Sci U S A 2013;110:8936–8941. PubMed PMC

Jemiola-Rzeminska M, Kruk J, Skowronek M, et al. . Location of ubiquinone homologues in liposome membranes studied by fluorescence anisotropy of diphenyl-hexatriene and trimethylammonium-diphenyl-hexatriene. Chem Phys Lipids 1996;79:55–63. PubMed

Ježek J, Dlasková A, Zelenka J, et al. . H2O2-activated mitochondrial phospholipase iPLA2γ prevents lipotoxic oxidative stress in synergy with UCP2, amplifies signaling via G-protein–coupled receptor GPR40, and regulates insulin secretion in pancreatic β-cells. Antioxid Redox Signal 2015;23:958–972. PubMed PMC

Ježek J, Plecitá-Hlavatá L, Ježek P. Aglycemic HepG2 cells switch from aminotransferase glutaminolytic pathway of pyruvate utilization to complete Krebs cycle at hypoxia. Front Endocrinol (Lausanne) 2018;9:637. PubMed PMC

Ježek P, Dlasková A. Dynamic of mitochondrial network, cristae, and mitochondrial nucleoids in pancreatic β-cells. Mitochondrion 2019;49:245–258. PubMed

Ježek P, Hlavatá L. Mitochondria in homeostasis of reactive oxygen species in cell, tissues, and organism. Int J Biochem Cell Biol 2005;37:2478–2503. PubMed

Jezek P, Holendova B, Garlid KD, et al. . Mitochondrial uncoupling proteins: Subtle regulators of cellular redox signaling. Antioxid Redox Signal 2018;29:667–714. PubMed PMC

Jezek P, Holendova B, Plecita-Hlavata L. Redox signaling from mitochondria: Signal propagation and its targets. Biomolecules 2020;10:93. PubMed PMC

Jezek P, Mahdi F, Garlid KD. Reconstitution of the beef heart and rat liver mitochondrial K+/H+ (Na+/H+) antiporter. Quantitation of K+ transport with the novel fluorescent probe, PBFI. J Biol Chem 1990;265:10522–10526. PubMed

Jezek P, Olejar T, Smolkova K, et al. . Antioxidant and regulatory role of mitochondrial uncoupling protein UCP2 in pancreatic beta-cells. Physiol Res 2014;63(Suppl 1):S73–S91. PubMed

Jezek P, Plecita-Hlavata L. Mitochondrial reticulum network dynamics in relation to oxidative stress, redox regulation, and hypoxia. Int J Biochem Cell Biol 2009;41:1790–1804. PubMed

Jezek P, Plecitá-Hlavatá L, Smolková, K. et al. Distinctions and similarities of cell bioenergetics and the role of mitochondria in hypoxia, cancer, and embryonic development. Int J Biochem Cell Biol 2010;42:604–622. PubMed

Jimenez-Blasco D, Busquets-Garcia A, Hebert-Chatelain E, et al. . Glucose metabolism links astroglial mitochondria to cannabinoid effects. Nature 2020;583:603–608. PubMed

Jussupow A, DI Luca A, Kaila VRI. How cardiolipin modulates the dynamics of respiratory complex I. Sci Adv 2019;5:eaav1850. PubMed PMC

Kaila VRI. Long-range proton-coupled electron transfer in biological energy conversion: Towards mechanistic understanding of respiratory complex I. J R Soc Interface 2018;15:20170916. PubMed PMC

Kaila VRI. Resolving chemical dynamics in biological energy conversion: Long-range proton-coupled electron transfer in respiratory complex I. Acc Chem Res 2021;54:4462–4473. PubMed PMC

Kampjut D, Sazanov LA. The coupling mechanism of mammalian respiratory complex I. Science 2020;370:eabc4209. PubMed

Kao SH, Yen MY, Wang AG, et al. . Changes in mitochondrial morphology and bioenergetics in human lymphoblastoid cells with four novel OPA1 mutations. Invest Ophthalmol Vis Sci 2015;56:2269–2278. PubMed

Karbowski M, Arnoult D, Chen H, et al. . Quantitation of mitochondrial dynamics by photolabeling of individual organelles shows that mitochondrial fusion is blocked during the Bax activation phase of apoptosis. J Cell Biol 2004;164:493–499. PubMed PMC

Katsikas H, Quinn PJ. The distribution of ubiquinone-10 in phospholipid bilayers. A study using differential scanning calorimetry. Eur J Biochem 1982;124:165–169. PubMed

Kaurola P, Sharma V, Vonk A, et al. . Distribution and dynamics of quinones in the lipid bilayer mimicking the inner membrane of mitochondria. Biochim Biophys Acta 2016;1858:2116–2122. PubMed

King MS, Sharpley MS, Hirst J. Reduction of hydrophilic ubiquinones by the flavin in mitochondrial NADH:ubiquinone oxidoreductase (complex I) and production of reactive oxygen species. Biochemistry 2009;48:2053–2062. PubMed PMC

Kishita Y, Shimura M, Kohda M, et al. . A novel homozygous variant in MICOS13/QIL1 causes hepato-encephalopathy with mitochondrial DNA depletion syndrome. Mol Genet Genomic Med 2020;8:e1427. PubMed PMC

Knott AB, Perkins G, Schwarzenbacher R, et al. . Mitochondrial fragmentation in neurodegeneration. Nat Rev Neurosci 2008;9:505–518. PubMed PMC

Koivunen P, Hirsila M, Remes AM, et al. . Inhibition of hypoxia-inducible factor (HIF) hydroxylases by citric acid cycle intermediates: Possible links between cell metabolism and stabilization of HIF. J Biol Chem 2007;282:4524–4532. PubMed

Kondadi AK, Anand R, Hänsch S, et al. . Cristae undergo continuous cycles of membrane remodelling in a MICOS-dependent manner. EMBO Rep 2020;21:e49776. PubMed PMC

Koob S, Barrera M, Anand R, et al. . The non-glycosylated isoform of MIC26 is a constituent of the mammalian MICOS complex and promotes formation of crista junctions. Biochim Biophys Acta 2015;1853:1551–1563. PubMed

Körner C, Barrera M, Dukanovic J, et al. . The C-terminal domain of Fcj1 is required for formation of crista junctions and interacts with the TOB/SAM complex in mitochondria. Mol Biol Cell 2012;23:2143–2155. PubMed PMC

Korwitz A, Merkwirth C, Richter-Dennerlein R, et al. . Loss of OMA1 delays neurodegeneration by preventing stress-induced OPA1 processing in mitochondria. J Cell Biol 2016;212:157–166. PubMed PMC

Kory N, Uit De Bos J, Van Der Rijt S, et al. . MCART1/SLC25A51 is required for mitochondrial NAD transport. Sci Adv 2020;6:eabe5310. PubMed PMC

Kravenska Y, Checchetto V, Szabo I. Routes for potassium ions across mitochondrial membranes: A biophysical point of view with special focus on the ATP-sensitive K+ channel. Biomolecules 2021;11:1172. PubMed PMC

Kühlbrandt W. Structure and mechanisms of F-type ATP synthases. Annu Rev Biochem 2019;88:515–549. PubMed

Kukat C, Davies KM, Wurm CA, et al. . Cross-strand binding of TFAM to a single mtDNA molecule forms the mitochondrial nucleoid. Proc Natl Acad Sci U S A 2015;112:11288–11293. PubMed PMC

Kussmaul L, Hirst J. The mechanism of superoxide production by NADH:ubiquinone oxidoreductase (complex I) from bovine heart mitochondria. Proc Natl Acad Sci U S A 2006;103:7607–7612. PubMed PMC

Küster U, Bohnensack R, Kunz W. Control of oxidative phosphorylation by the extra-mitochondrial ATP/ADP ratio. Biochim Biophys Acta 1976;440:391–402. PubMed

Lai Y, Lin P, Chen M, et al. . Restoration of L-OPA1 alleviates acute ischemic stroke injury in rats via inhibiting neuronal apoptosis and preserving mitochondrial function. Redox Biol 2020;34:101503. PubMed PMC

Lambert AJ, Brand MD.. Inhibitors of the quinone-binding site allow rapid superoxide production from mitochondrial NADH:ubiquinone oxidoreductase (complex I). J Biol Chem 2004a;279:39414–39420. PubMed

Lambert AJ, Brand MD.. Superoxide production by NADH:ubiquinone oxidoreductase (complex I) depends on the pH gradient across the mitochondrial inner membrane. Biochem J 2004b;382:511–517. PubMed PMC

Landes T, Emorine LJ, Courilleau D, et al. . The BH3-only Bnip3 binds to the dynamin Opa1 to promote mitochondrial fragmentation and apoptosis by distinct mechanisms. EMBO Rep 2010;11:459–465. PubMed PMC

Lang BF, Gray MW, Burger G. Mitochondrial genome evolution and the origin of eukaryotes. Annu Rev Genet 1999;33:351–397. PubMed

Lee G, Won HS, Lee YM, et al. . Oxidative dimerization of PHD2 is responsible for its inactivation and contributes to metabolic reprogramming via HIF-1alpha activation. Sci Rep 2016;6:18928. PubMed PMC

Lenaz G, Samorì B, Fato R, et al. . Localization and preferred orientations of ubiquinone homologs in model bilayers. Biochem Cell Biol 1992;70:504–514. PubMed

Lenaz G, Tioli G, Falasca AI, et al. . Complex I function in mitochondrial supercomplexes. Biochim Biophys Acta 2016;1857:991–1000. PubMed

Letts JA, Fiedorczuk K, Sazanov LA. The architecture of respiratory supercomplexes. Nature 2016;537:644–648. PubMed

Li D, Jiang C, Mei G, et al. . Quercetin alleviates ferroptosis of pancreatic β cells in type 2 diabetes. Nutrients 2020a;12:2954. PubMed PMC

Li S, Wu Z, Li Y, et al. . Altered MICOS morphology and mitochondrial ion homeostasis contribute to poly(GR) toxicity associated with C9-ALS/FTD. Cell Rep 2020b;32:107989. PubMed PMC

Li XQ, Hegazy MG, Mahdi F, et al. . Purification of a reconstitutively active K+/H+ antiporter from rat liver mitochondria. J Biol Chem 1990;265:15316–15322. PubMed

Liu Y, Mao C, Liu S, et al. . Proline dehydrogenase in cancer: Apoptosis, autophagy, nutrient dependency and cancer therapy. Amino Acids 2021;53:1891–1902. PubMed

Llorente-Garcia I, Lenn T, Erhardt H, et al. . Single-molecule in vivo imaging of bacterial respiratory complexes indicates delocalized oxidative phosphorylation. Biochim Biophys Acta 2014;1837:811–824. PubMed

Lobo-Jarne T, Ugalde C. Respiratory chain supercomplexes: Structures, function and biogenesis. Semin Cell Dev Biol 2018;76:179–190. PubMed PMC

Lopez-Fabuel I, Le Douce J, Logan A, et al. . Complex I assembly into supercomplexes determines differential mitochondrial ROS production in neurons and astrocytes. Proc Natl Acad Sci U S A 2016;113:13063–13068. PubMed PMC

López-Ríos F, Sánchez-Aragó M, García-García E, et al. . Loss of the mitochondrial bioenergetic capacity underlies the glucose avidity of carcinomas. Cancer Res 2007;67:9013–9017. PubMed

Lu H, Dalgard CL, Mohyeldin A, et al. . Reversible inactivation of HIF-1 prolyl hydroxylases allows cell metabolism to control basal HIF-1. J Biol Chem 2005;280:41928–41939. PubMed

Lu H, Koshkin V, Allister EM, et al. . Molecular and metabolic evidence for mitochondrial defects associated with beta-cell dysfunction in a mouse model of type 2 diabetes. Diabetes 2010;59:448–459. PubMed PMC

Luongo TS, Eller JM, Lu MJ, et al. . SLC25A51 is a mammalian mitochondrial NAD+ transporter. Nature 2020;588:174–179. PubMed PMC

Madreiter-Sokolowski CT, Thomas C, Ristow M. Interrelation between ROS and Ca2+ in aging and age-related diseases. Redox Biol 2020;36:101678. PubMed PMC

Mailloux RJ, Young A, Chalker J, et al. . Choline and dimethylglycine produce superoxide/hydrogen peroxide from the electron transport chain in liver mitochondria. FEBS Lett 2016;590:4318–4328. PubMed

Makino A, Suarez J, Gawlowski T, et al. . Regulation of mitochondrial morphology and function by O-GlcNAcylation in neonatal cardiac myocytes. Am J Physiol Regul Integr Comp Physiol 2011;300:R1296–R1302. PubMed PMC

Manhas N, Duong QV, Lee P, et al. . Computationally modeling mammalian succinate dehydrogenase kinetics identifies the origins and primary determinants of ROS production. J Biol Chem 2020;295:15262–15279. PubMed PMC

Mannella CA. Structural diversity of mitochondria: Functional implications. Ann N Y Acad Sci 2008;1147:171–179. PubMed PMC

Mannella CA. Consequences of folding the mitochondrial inner membrane. Front Physiol 2020;11:536. PubMed PMC

Mannella CA, Marko M, Buttle K. Reconsidering mitochondrial structure: New views of an old organelle. Trends Biochem Sci 1997;22:37–38. PubMed

Mannella CA, Pfeiffer DR, Bradshaw PC, et al. . Topology of the mitochondrial inner membrane: Dynamics and bioenergetic implications. IUBMB Life 2001;52:93–100. PubMed

Maranzana E, Barbero G, Falasca AI, et al. . Mitochondrial respiratory supercomplex association limits production of reactive oxygen species from complex I. Antioxid Redox Signal 2013;19:1469–1480. PubMed PMC

Martinez-Reyes I, Diebold LP, Kong H, et al. . TCA cycle and mitochondrial membrane potential are necessary for diverse biological functions. Mol Cell 2016;61:199–209. PubMed PMC

Matlin KS. The heuristic of form: Mitochondrial morphology and the explanation of oxidative phosphorylation. J Hist Biol 2016;49:37–94. PubMed

McArthur K, Whitehead LW, Heddleston JM, et al. . BAK/BAX macropores facilitate mitochondrial herniation and mtDNA efflux during apoptosis. Science 2018;359:eaao6047. PubMed

McDonald AE, Pichaud N, Darveau CA. “Alternative” fuels contributing to mitochondrial electron transport: Importance of non-classical pathways in the diversity of animal metabolism. Comp Biochem Physiol B Biochem Mol Biol 2018;224:185–194. PubMed

McElroy GS, Chandel NS. Mitochondria control acute and chronic responses to hypoxia. Exp Cell Res 2017;356:217–222. PubMed PMC

McNally MA, Soane L, Roelofs BA, et al. . The N-terminal helix of Bcl-xL targets mitochondria. Mitochondrion 2013;13:119–124. PubMed PMC

Meeusen S, Devay R, Block J, et al. . Mitochondrial inner-membrane fusion and crista maintenance requires the dynamin-related GTPase Mgm1. Cell 2006;127:383–395. PubMed

Mehta NK, Mehta KD. Protein kinase C-beta: An emerging connection between nutrient excess and obesity. Biochim Biophys Acta 2014;1841:1491–1497. PubMed

Merkwirth C, Dargazanli S, Tatsuta T, et al. . Prohibitins control cell proliferation and apoptosis by regulating OPA1-dependent cristae morphogenesis in mitochondria. Genes Dev 2008;22:476–488. PubMed PMC

Metz G, Howard KP, Van Liemt WBS, et al. . NMR studies of ubiquinone location in oriented model membranes: Evidence for a single motionally-averaged population. J Am Chem Soc 1995;117:564–565.

Meyrat A, Von Ballmoos C. ATP synthesis at physiological nucleotide concentrations. Sci Rep 2019;9:3070. PubMed PMC

Mills E, O'Neill LA. Succinate: A metabolic signal in inflammation. Trends Cell Biol 2014;24:313–320. PubMed

Mills EL, Kelly B, Logan A, et al. . Succinate dehydrogenase supports metabolic repurposing of mitochondria to drive inflammatory macrophages. Cell 2016;167:457..e13–470.e13. PubMed PMC

Mills EL, Pierce KA, Jedrychowski MP, et al. . Accumulation of succinate controls activation of adipose tissue thermogenesis. Nature 2018a;560:102–106. PubMed PMC

Mills EL, Ryan DG, Prag HA, et al. . Itaconate is an anti-inflammatory metabolite that activates Nrf2 via alkylation of KEAP1. Nature 2018b;556:113–117. PubMed PMC

Mishra M, Duraisamy AJ, Bhattacharjee S, et al. . Adaptor protein p66Shc: A link between cytosolic and mitochondrial dysfunction in the development of diabetic retinopathy. Antioxid Redox Signal 2019;30:1621–1634. PubMed PMC

Missaglia S, Tavian D, Angelini C. ETF dehydrogenase advances in molecular genetics and impact on treatment. Crit Rev Biochem Mol Biol 2021;56:360–372. PubMed

Mitchell P, Moyle J. Chemiosmotic hypothesis of oxidative phosphorylation. Nature 1967;213:137–139. PubMed

Moe A, Di Trani J, Rubinstein JL, et al. . Cryo-EM structure and kinetics reveal electron transfer by 2D diffusion of cytochrome c in the yeast III-IV respiratory supercomplex. Proc Natl Acad Sci U S A 2021;118:e2021157118. PubMed PMC

Monsalves-Alvarez M, Morales PE, Castro-Sepulveda M, et al. . β-Hydroxybutyrate increases exercise capacity associated with changes in mitochondrial function in skeletal muscle. Nutrients 2020;12:1930. PubMed PMC

Mootha VK, Wei MC, Buttle KF, et al. . A reversible component of mitochondrial respiratory dysfunction in apoptosis can be rescued by exogenous cytochrome c. EMBO J 2001;20:661–671. PubMed PMC

Muller FL, Liu Y, Van Remmen H. Complex III releases superoxide to both sides of the inner mitochondrial membrane. J Biol Chem 2004;279:49064–49073. PubMed

Nakamura S, Matsui A, Akabane S, et al. . The mitochondrial inner membrane protein LETM1 modulates cristae organization through its LETM domain. Commun Biol 2020;3:99. PubMed PMC

Natarajan GK, Mishra J, Camara AKS, et al. . LETM1: A single entity with diverse impact on mitochondrial metabolism and cellular signaling. Front Physiol 2021;12:637852. PubMed PMC

Navaratnarajah T, Anand R, Reichert AS, et al. . The relevance of mitochondrial morphology for human disease. Int J Biochem Cell Biol 2021;134:105951. PubMed

Nerdal W, Nilsen TR, Steinkopf S. CoenzymeQ10 localizations in model membranes. A Langmuir monolayer study. Biophys Chem 2015;207:74–81. PubMed

Nesci S, Lenaz G. The mitochondrial energy conversion involves cytochrome c diffusion into the respiratory supercomplexes. Biochim Biophys Acta Bioenerg 2021;1862:148394. PubMed

Nesterov S, Chesnokov Y, Kamyshinsky R, et al. . Ordered clusters of the complete oxidative phosphorylation system in cardiac mitochondria. Int J Mol Sci 2021;22:1462. PubMed PMC

Nguyen LK, Cavadas MA, Scholz CC, et al. . A dynamic model of the hypoxia-inducible factor 1alpha (HIF-1alpha) network. J Cell Sci 2013;126:1454–1463. PubMed

Nielsen J, Gejl KD, Hey-Mogensen M, et al. . Plasticity in mitochondrial cristae density allows metabolic capacity modulation in human skeletal muscle. J Physiol 2017;595:2839–2847. PubMed PMC

Nuber F, Mérono L, Oppermann S, et al. . A quinol anion as catalytic intermediate coupling proton translocation with electron transfer in E. coli respiratory complex I. Front Chem 2021;9:672969. PubMed PMC

Ohnishi ST, Shinzawa-Itoh K, Ohta K, et al. . New insights into the superoxide generation sites in bovine heart NADH-ubiquinone oxidoreduc© (complex I): The significance of protein-associated ubiquinone and the dynamic shifting of generation sites between semiflavin and semiquinone radicals. Biochim Biophys Acta 2010;1797:1901–1909. PubMed

Olichon A, Baricault L, Gas N, et al. . Loss of OPA1 perturbates the mitochondrial inner membrane structure and integrity, leading to cytochrome c release and apoptosis. J Biol Chem 2003;278:7743–7746. PubMed

Ondarroa M, Quinn PJ. A difference infrared-spectroscopic study of the interaction of ubiquinone-10 with phospholipid bilayers. Biochem J 1986;240:325–331. PubMed PMC

Ong SB, Kalkhoran SB, Hernández-Reséndiz S, et al. . Mitochondrial-shaping proteins in cardiac health and disease—The long and the short of it! Cardiovasc Drugs Ther 2017;31:87–107. PubMed PMC

Orr AL, Quinlan CL, Perevoshchikova IV, et al. . A refined analysis of superoxide production by mitochondrial sn-glycerol 3-phosphate dehydrogenase. J Biol Chem 2012;287:42921–42935. PubMed PMC

Orr AL, Vargas L, Turk CN, et al. . Suppressors of superoxide production from mitochondrial complex III. Nat Chem Biol 2015;11:834–836. PubMed PMC

Osman C, Merkwirth C, Langer T. Prohibitins and the functional compartmentalization of mitochondrial membranes. J Cell Sci 2009;122:3823–3830. PubMed

Otera H, Miyata N, Kuge O, et al. . Drp1-dependent mitochondrial fission via MiD49/51 is essential for apoptotic cristae remodeling. J Cell Biol 2016;212:531–544. PubMed PMC

Ott C, Dorsch E, Fraunholz M, et al. . Detailed analysis of the human mitochondrial contact site complex indicate a hierarchy of subunits. PLoS One 2015;10:e0120213. PubMed PMC

Ouyang Y, Bott AJ, Rutter J. Maestro of the SereNADe: SLC25A51 orchestrates mitochondrial NAD. Trends Biochem Sci 2021;46:348–350. PubMed PMC

Pagacz J, Broniec A, Wolska M, et al. . ROS signaling capacity of cytochrome bc1: Opposing effects of adaptive and pathogenic mitochondrial mutations. Free Radic Biol Med 2021;163:243–254. PubMed

Pagano G, Talamanca AA, Castello G, et al. . Oxidative stress and mitochondrial dysfunction across broad-ranging pathologies: Toward mitochondria-targeted clinical strategies. Oxid Med Cell Longev 2014;2014:541230. PubMed PMC

Paggio A, Checchetto V, Campo A, et al. . Identification of an ATP-sensitive potassium channel in mitochondria. Nature 2019;572:609–613. PubMed PMC

Palade GE. The fine structure of mitochondria. Anat Rec 1952;114:427–451. PubMed

Park SY, Trinity JD, Gifford JR, et al. . Mitochondrial function in heart failure: The impact of ischemic and non-ischemic etiology. Int J Cardiol 2016;220:711–717. PubMed PMC

Patten DA, Lafleur VN, Robitaille GA, et al. . Hypoxia-inducible factor-1 activation in n©poxic conditions: The essential role of mitochondrial-derived reactive oxygen species. Mol Biol Cell 2010;21:3247–3257. PubMed PMC

Patten DA, Wong J, Khacho M, et al. . OPA1-dependent cristae modulation is essential for cellular adaptation to metabolic demand. EMBO J 2014;33:2676–2691. PubMed PMC

Paumard P, Vaillier J, Coulary B, et al. . The ATP synthase is involved in generating mitochondrial cristae morphology. EMBO J 2002;21:221–230. PubMed PMC

Pellegrini M, Finetti F, Petronilli V, et al. . T. p66SHC promotes T cell apoptosis by inducing mitochondrial dysfunction and impaired Ca2+ homeostasis. Cell Death Differ 2007;14:338–347. PubMed

Peralta S, Goffart S, Williams SL, et al. . ATAD3 controls mitochondrial cristae structure in mouse muscle, influencing mtDNA replication and cholesterol levels. J Cell Sci 2018;131:jcs217075. PubMed PMC

Perciavalle RM, Stewart DP, Koss B, et al. . Anti-apoptotic MCL-1 localizes to the mitochondrial matrix and couples mitochondrial fusion to respiration. Nat Cell Biol 2012;14:575–583. PubMed PMC

Perevoshchikova IV, Quinlan CL, Orr AL, et al. . Sites of superoxide and hydrogen peroxide production during fatty acid oxidation in rat skeletal muscle mitochondria. Free Radic Biol Med 2013;61:298–309. PubMed PMC

Perkins G, Lee JH, Park S, et al. . Altered outer hair cell mitochondrial and subsurface cisternae connectomics are candidate mechanisms for hearing loss in mice. J Neurosci 2020;40:8556–8572. PubMed PMC

Perkins GA, Renken CW, Song JY, et al. . Electron tomography of large, multicomponent biological structures. J Struct Biol 1997;120:219–227. PubMed

Perkins GA, Tjong J, Brown JM, et al. . The micro-architecture of mitochondria at active zones: Electron tomography reveals novel anchoring scaffolds and cristae structured for high-rate metabolism. J Neurosci 2010;30:1015–1026. PubMed PMC

Pernas L, Scorrano L. Mito-morphosis: Mitochondrial fusion, fission, and cristae remodeling as key mediators of cellular function. Annu Rev Physiol 2016;78:505–531. PubMed

Pfanner N, Van Der Laan M, Amati P, et al. . Uniform nomenclature for the mitochondrial contact site and cristae organizing system. J Cell Biol 2014;204:1083–1086. PubMed PMC

Piao L, Fang YH, Hamanaka RB, et al. . Suppression of superoxide-hydrogen peroxide production at site IQ of mitochondrial complex I attenuates myocardial stunning and improves postcardiac arrest outcomes. Crit Care Med 2020;48:e133–e140. PubMed PMC

Pickles S, Vigié P, Youle RJ. Mitophagy and quality control mechanisms in mitochondrial maintenance. Curr Biol 2018;28:R170–R185. PubMed PMC

Plecitá-Hlavatá L, D'alessandro A, El Kasmi K, et al. . Metabolic reprogramming and redox signaling in pulmonary hypertension. Adv Exp Med Biol 2017;967:241–260. PubMed

Plecitá-Hlavatá L, Engstová H, Alán L, et al. . Hypoxic HepG2 cell adaptation decreases ATP synthase dimers and ATP production in inflated cristae by mitofilin down-regulation concomitant to MICOS clustering. FASEB J 2016;30:1941–1957. PubMed

Plecitá-Hlavatá L, Engstová H, Holendová B, et al. . Mitochondrial superoxide production decreases on glucose-stimulated insulin secretion in pancreatic β cells due to decreasing mitochondrial matrix NADH/NAD+ ratio. Antioxid Redox Signal 2020;33(12):789–815. PubMed PMC

Plecitá-Hlavatá L, Ježek J, Ježek P. Aglycemia keeps mitochondrial oxidative phosphorylation under hypoxic conditions in HepG2 cells. J Bioenerg Biomembr 2015;47:467–476. PubMed

Plecitá-Hlavatá L, Ježek P. Integration of superoxide formation and cristae morphology for mitochondrial redox signaling. Int J Biochem Cell Biol 2016;80:31–50. PubMed

Plecitá-Hlavatá L, Lessard M, Santorová J, et al. . Mitochondrial oxidative phosphorylation and energetic status are reflected by morphology of mitochondrial network in INS-1E and HEP-G2 cells viewed by 4Pi microscopy. Biochim Biophys Acta 2008;1777:834–846. PubMed

Průchová P, Gotvaldová K, Smolková K, et al. . Antioxidant role and cardiolipin remodeling by redox-activated mitochondrial Ca2+-independent phospholipase A2γ in the brain. Antioxidants (Basel) 2022;11:198. PubMed PMC

Pryde KR, Hirst J. Superoxide is produced by the reduced flavin in mitochondrial complex I: A single, unified mechanism that applies during both forward and reverse electron transfer. J Biol Chem 2011;286:18056–18065. PubMed PMC

Quinlan CL, Gerencser AA, Treberg JR, et al. . The mechanism of superoxide production by the antimycin-inhibited mitochondrial Q-cycle. J Biol Chem 2011;286:31361–31372. PubMed PMC

Quinlan CL, Goncalves RL, Hey-Mogensen M, et al. . The 2-oxoacid dehydrogenase complexes in mitochondria can produce superoxide/hydrogen peroxide at much higher rates than complex I. J Biol Chem 2014;289:8312–8325. PubMed PMC

Quinlan CL, Orr AL, Perevoshchikova IV, et al. . Mitochondrial complex II can generate reactive oxygen species at high rates in both the forward and reverse reactions. J Biol Chem 2012a;287:27255–27264. PubMed PMC

Quinlan CL, Perevoshchikova IV, Hey-Mogensen M, et al. . Sites of reactive oxygen species generation by mitochondria oxidizing different substrates. Redox Biol 2013;1:304–312. PubMed PMC

Quinlan CL, Treberg JR, Perevoshchikova IV, et al. . Native rates of superoxide production from multiple sites in isolated mitochondria measured using endogenous reporters. Free Radic Biol Med 2012b;53:1807–1817. PubMed PMC

Quintana-Cabrera R, Manjarrés-Raza I, Vicente-Gutiérrez C, et al. . Opa1 relies on cristae preservation and ATP synthase to curtail reactive oxygen species accumulation in mitochondria. Redox Biol 2021;41:101944. PubMed PMC

Quintana-Cabrera R, Mehrotra A, Rigoni G, et al. . Who and how in the regulation of mitochondrial cristae shape and function. Biochem Biophys Res Commun 2018a;500:94–101. PubMed

Quintana-Cabrera R, Quirin C, Glytsou C, et al. . The cristae modulator Optic atrophy 1 requires mitochondrial ATP synthase oligomers to safeguard mitochondrial function. Nat Commun 2018b;9:3399. PubMed PMC

Quinzii CM, Luna-Sanchez M, Ziosi M, et al. . The role of sulfide oxidation impairment in the pathogenesis of primary CoQ deficiency. Front Physiol 2017;8:525. PubMed PMC

Quirk A, Lardner MJ, Tun Z, et al. . Surface-enhanced infrared spectroscopy and neutron reflectivity studies of ubiquinone in hybrid bilayer membranes under potential control. Langmuir 2016;32:2225–2235. PubMed

Rabl R, Soubannier V, Scholz R, et al. . Formation of cristae and crista junctions in mitochondria depends on antagonism between Fcj1 and Su e/g. J Cell Biol 2009;185:1047–1063. PubMed PMC

Rajab BS, Kassab S, Stonall CD, et al. . Differential remodelling of mitochondrial subpopulations and mitochondrial dysfunction are a feature of early stage diabetes. Sci Rep 2022;12:978. PubMed PMC

Rampelt H, Bohnert M, Zerbes RM, et al. . Mic10, a core subunit of the mitochondrial contact site and cristae organizing system, interacts with the dimeric F1Fo-ATP synthase. J Mol Biol 2017;429:1162–1170. PubMed

Ranjbarvaziri S, Kooiker KB, Ellenberger M, et al. . Altered cardiac energetics and mitochondrial dysfunction in hypertrophic cardiomyopathy. Circulation 2021;144:1714–1731. PubMed PMC

Reichart G, Mayer J, Zehm C, et al. . Mitochondrial complex IV mutation increases reactive oxygen species production and reduces lifespan in aged mice. Acta Physiol (Oxf) 2019;225:e13214. PubMed

Ren L, Xuan L, Han F, et al. . Vitamin D supplementation rescues simvastatin induced myopathy in mice via improving mitochondrial cristae shape. Toxicol Appl Pharmacol 2020;401:115076. PubMed

Rieger B, Arroum T, Borowski MT, et al. . Mitochondrial F(1) F(O) ATP synthase determines the local proton motive force at cristae rims. EMBO Rep 2021;22:e52727. PubMed PMC

Rieger B, Junge W, Busch KB. Lateral pH gradient between OXPHOS complex IV and F(0)F(1) ATP-synthase in folded mitochondrial membranes. Nat Commun 2014;5:3103. PubMed

Robb EL, Hall AR, Prime TA, et al. . Control of mitochondrial superoxide production by reverse electron transport at complex I. J Biol Chem 2018;293:9869–9879. PubMed PMC

Roos S, Hedberg-Oldfors C, Visuttijai K, et al. . Expression pattern of mitochondrial respiratory chain enzymes in skeletal muscle of patients with mitochondrial myopathy associated with the homoplasmic m.14674T>C variant. Brain Pathol 2022;32(4):e13038. PubMed PMC

Röpke M, Riepl D, Saura P, et al. . Deactivation blocks proton pathways in the mitochondrial complex I. Proc Natl Acad Sci U S A 2021;118:e2019498118. PubMed PMC

Ryan DG, Murphy MP, Frezza C, et al. . Coupling Krebs cycle metabolites to signaling in immunity and cancer. Nat Metab 2019;1:16–33. PubMed PMC

Sabharwal SS, Waypa GB, Marks JD, et al. . Peroxiredoxin-5 targeted to the mitochondrial intermembrane space attenuates hypoxia-induced reactive oxygen species signaling. Biochem J 2013;456:337–346. PubMed PMC

Salisbury-Ruf CT, Bertram CC, Vergeade A, et al. . Bid maintains mitochondrial cristae structure and function and protects against cardiac disease in an integrative genomics study. Elife 2018;7:e40907. PubMed PMC

Salo AB, Husen P, Solov'yov IA. Charge transfer at the Qo-site of the cytochrome bc1 complex leads to superoxide production. J Phys Chem B 2017;121:1771–1782. PubMed

Salvi F, Gadda G. Human choline dehydrogenase: Medical promises and biochemical challenges. Arch Biochem Biophys 2013;537:243–252. PubMed PMC

Samant SA, Zhang HJ, Hong Z, et al. . Sirt3 deacetylates and activates OPA1 to regulate mitochondrial dynamics during stress. Mol Cell Biol 2014;34:807–819. PubMed PMC

Samorì B, Lenaz G, Battino M, et al. . On coenzyme Q orientation in membranes: A linear dichroism study of ubiquinones in a model bilayer. J Membr Biol 1992;128:193–203. PubMed

Sarewicz M, Borek A, Cieluch E, et al. . Discrimination between two possible reaction sequences that create potential risk of generation of deleterious radicals by cytochrome bc1. Implications for the mechanism of superoxide production. Biochim Biophys Acta 2010;1797:1820–1827. PubMed PMC

Saura P, Kaila VRI. Energetics and dynamics of proton-coupled electron transfer in the NADH/FMN site of respiratory complex I. J Am Chem Soc 2019;141:5710–5719. PubMed PMC

Schlattner U, Tokarska-Schlattner M, Rousseau D, et al. . Mitochondrial cardiolipin/phospholipid trafficking: The role of membrane contact site complexes and lipid transfer proteins. Chem Phys Lipids 2014;179:32–41. PubMed

Schmidt R, Wurm CA, Punge A, et al. . Mitochondrial cristae revealed with focused light. Nano Lett 2009;9:2508–2510. PubMed

Schödel J, Oikonomopoulos S, Ragoussis J, et al. . High-resolution genome-wide mapping of HIF-binding sites by ChIP-seq. Blood 2011;117:e207–e217. PubMed PMC

Schöttl T, Pachl F, Giesbertz P, et al. . Proteomic and metabolite profiling reveals profound structural and metabolic reorganization of adipocyte mitochondria in obesity. Obesity (Silver Spring) 2020;28:590–600. PubMed

Schroedl C, Mcclintock, DS, Budinger GR, et al. . Hypoxic but not anoxic stabilization of Hif-1alpha requires mitochondrial reactive oxygen species. Am J Physiol Lung Cell Mol Physiol 2002;283:L922–L931. PubMed

Scorrano L, Ashiya M, Buttle K, et al. . A distinct pathway remodels mitochondrial cristae and mobilizes cytochrome c during apoptosis. Dev Cell 2002;2:55–67. PubMed

Scorrano L, De Matteis MA, Emr S, et al. . Coming together to define membrane contact sites. Nat Commun 2019;10:1287. PubMed PMC

Sharma S, Bhattarai S, Ara H, Sunet al. SOD2 deficiency in cardiomyocytes defines defective mitochondrial bioenergetics as a cause of lethal dilated cardiomyopathy. Redox Biol 2020;37:101740. PubMed PMC

Shim SH, Xia C, Zhong G, et al. . Super-resolution fluorescence imaging of organelles in live cells with photoswitchable membrane probes. Proc Natl Acad Sci U S A 2012;109:13978–13983. PubMed PMC

Shin JY, Chung YS, Kang B, et al. . Co-delivery of LETM1 and CTMP synergistically inhibits tumor growth in H-ras12V liver cancer model mice. Cancer Gene Ther 2013;20:186–194. PubMed

Shrivastava M, Das TK, Behari M, et al. . Ultrastructural variations in platelets and platelet mitochondria: A novel feature in amyotrophic lateral sclerosis. Ultrastruct Pathol 2011;35:52–59. PubMed

Siebels I, Dröse S. Q-site inhibitor induced ROS production of mitochondrial complex II is attenuated by TCA cycle dicarboxylates. Biochim Biophys Acta 2013;1827:1156–1164. PubMed

Siegmund SE, Grassucci R, Carter SD, et al. . Three-dimensional analysis of mitochondrial crista ultrastructure in a patient with leigh syndrome by in situ cryoelectron tomography. iScience 2018;6:83–91. PubMed PMC

Sies H, Jones DP. Reactive oxygen species (ROS) as pleiotropic physiological signaling agents. Nat Rev Mol Cell Biol 2020;21:363–383. PubMed

Signorile A, De Rasmo D, Cormio A, et al. . Human ovarian cancer tissue exhibits increase of mitochondrial biogenesis and cristae remodeling. Cancers (Basel) 2019;11:1350. PubMed PMC

Simonnet H, Demont J, Pfeiffer K, et al. . Mitochondrial complex I is deficient in renal oncocytomas. Carcinogenesis 2003;24:1461–1466. PubMed

Singh RK, Saini S, Verma D, et al. . Mitochondrial ND5 mutation mediated elevated ROS regulates apoptotic pathway epigenetically in a P53 dependent manner for generating pro-cancerous phenotypes. Mitochondrion 2017;35:35–43. PubMed

Slade L, Chalker J, Kuksal N, et al. . Examination of the superoxide/hydrogen peroxide forming and quenching potential of mouse liver mitochondria. Biochim Biophys Acta Gen Subj 2017;1861:1960–1969. PubMed

Sládková J, Spáčilová J, Čapek M, et al. . Analysis of mitochondrial network morphology in cultured myoblasts from patients with mitochondrial disorders. Ultrastruct Pathol 2015;39:340–350. PubMed

Smyrnias I. The mitochondrial unfolded protein response and its diverse roles in cellular stress. Int J Biochem Cell Biol 2021;133:105934. PubMed

Söderhäll JA, Laaksonen A. Molecular dynamics simulations of ubiquinone inside a lipid bilayer. J Phys Chem B 2001;105:9308–9315.

Spikes TE, Montgomery MG, Walker JE. Structure of the dimeric ATP synthase from bovine mitochondria. Proc Natl Acad Sci U S A 2020;117:23519–23526. PubMed PMC

Spikes TE, Montgomery MG, Walker JE. Interface mobility between monomers in dimeric bovine ATP synthase participates in the ultrastructure of inner mitochondrial membranes. Proc Natl Acad Sci U S A 2021;118:e2021012118. PubMed PMC

St-Pierre J, Buckingham JA, Roebuck SJ, et al. . Topology of superoxide production from different sites in the mitochondrial electron transport chain. J Biol Chem 2002;277:44784–44790. PubMed

Stephan T, Brüser C, Deckers M, et al. . MICOS assembly controls mitochondrial inner membrane remodeling and crista junction redistribution to mediate cristae formation. EMBO J 2020;39:e104105. PubMed PMC

Stephan T, Roesch A, Riedel D, et al. . Live-cell STED nanoscopy of mitochondrial cristae. Sci Rep 2019;9:12419. PubMed PMC

Stoldt S, Stephan T, Jans DC, et al. . Mic60 exhibits a coordinated clustered distribution along and across yeast and mammalian mitochondria. Proc Natl Acad Sci U S A 2019;116:9853–9858. PubMed PMC

Sun MG, Williams J, Munoz-Pinedo C, et al. . Correlated three-dimensional light and electron microscopy reveals transformation of mitochondria during apoptosis. Nat Cell Biol 2007;9:1057–1065. PubMed

Supale S, Thorel F, Merkwirth C, et al. . Loss of prohibitin induces mitochondrial damages altering β-cell function and survival and is responsible for gradual diabetes development. Diabetes 2013;62:3488–3499. PubMed PMC

Tatsuta T, Langer T.. Intramitochondrial phospholipid trafficking. Biochim Biophys Acta Mol Cell Biol Lipids 2017a;1862:81–89. PubMed

Tatsuta T, Langer T.. Prohibitins. Curr Biol 2017b;27:R629–R631. PubMed

Tatsuta T, Model K, Langer T. Formation of membrane-bound ring complexes by prohibitins in mitochondria. Mol Biol Cell 2005;16:248–259. PubMed PMC

Tauber J, Dlasková A, Šantorová J, et al. . Distribution of mitochondrial nucleoids upon mitochondrial network fragmentation and network reintegration in HEPG2 cells. Int J Biochem Cell Biol 2013;45:593–603. PubMed

Treberg JR, Quinlan CL, Brand MD. Hydrogen peroxide efflux from muscle mitochondria underestimates matrix superoxide production—A correction using glutathione depletion. FEBS J 2010;277:2766–2778. PubMed PMC

Treberg JR, Quinlan CL, Brand MD. Evidence for two sites of superoxide production by mitochondrial NADH-ubiquinone oxidoreductase (complex I). J Biol Chem 2011;286:27103–27110. PubMed PMC

Tretter L, Patocs A, Chinopoulos C. Succinate, an intermediate in metabolism, signal transduction, ROS, hypoxia, and tumorigenesis. Biochim Biophys Acta 2016;1857:1086–1101. PubMed

Trewin AJ, Bahr LL, Almast A, et al. . Mitochondrial reactive oxygen species generated at the complex-II matrix or intermembrane space microdomain have distinct effects on redox signaling and stress sensitivity in Caenorhabditis elegans. Antioxid Redox Signal 2019;31:594–607. PubMed PMC

Tsai PI, Lin CH, Hsieh CH, et al. . PINK1 phosphorylates Mic60/mitofilin to control structural plasticity of mitochondrial crista junctions. Mol Cell 2018;69:744..e6–756.e6. PubMed

Twig G, Elorza A, Molina AJ, et al. . Fission and selective fusion govern mitochondrial segregation and elimination by autophagy. EMBO J 2008;27:433–446. PubMed PMC

Ulivieri C. Cell death: Insights into the ultrastructure of mitochondria. Tissue Cell 2010;42:339–347. PubMed

Urbach J, Kondadi AK, David C, et al. . Conserved GxxxG and WN motifs of MIC13 are essential for bridging two Micos subcomplexes. Biochim Biophys Acta Biomembr 2021;1863:183683. PubMed

Varanita T, Soriano ME, Romanello V, et al. . The OPA1-dependent mitochondrial cristae remodeling pathway controls atrophic, apoptotic, and ischemic tissue damage. Cell Metab 2015;21:834–844. PubMed PMC

Vercellino I, Sazanov LA. The assembly, regulation and function of the mitochondrial respiratory chain. Nat Rev Mol Cell Biol 2022;23:141–161. PubMed

Vergeade A, Bertram CC, Bikineyeva AT, et al. . Cardiolipin fatty acid remodeling regulates mitochondrial function by modifying the electron entry point in the respiratory chain. Mitochondrion 2016;28:88–95. PubMed PMC

Verkhovskaya M, Bloch DA. Energy-converting respiratory complex I: On the way to the molecular mechanism of the proton pump. Int J Biochem Cell Biol 2013;45:491–511. PubMed

Verkhovskaya ML, Belevich N, Euro L, et al. . Real-time electron transfer in respiratory complex I. Proc Natl Acad Sci U S A 2008;105:3763–3767. PubMed PMC

Vicente-Gutierrez C, Bonora N, Bobo-Jimenez V, et al. . Astrocytic mitochondrial ROS modulate brain metabolism and mouse behaviour. Nat Metab 2019;1:201–211. PubMed

Vincent AE, Ng YS, White K, et al. . The spectrum of mitochondrial ultrastructural defects in mitochondrial myopathy. Sci Rep 2016;6:30610. PubMed PMC

Vinogradov AD, Grivennikova VG. Oxidation of NADH and ROS production by respiratory complex I. Biochim Biophys Acta 2016;1857:863–871. PubMed

Vogel F, Bornhövd C, Neupert W, et al. . Dynamic subcompartmentalization of the mitochondrial inner membrane. J Cell Biol 2006;175:237–247. PubMed PMC

Wagner M, Bertero E, Nickel A, et al. . Selective NADH communication from α-ketoglutarate dehydrogenase to mitochondrial transhydrogenase prevents reactive oxygen species formation under reducing conditions in the heart. Basic Res Cardiol 2020;115:53. PubMed PMC

Wang C, Taki M, Sato Y, et al. . A photostable fluorescent marker for the superresolution live imaging of the dynamic structure of the mitochondrial cristae. Proc Natl Acad Sci U S A 2019a;116:15817–15822. PubMed PMC

Wang G, Fan Y, Cao P, et al. . Insight into the mitochondrial unfolded protein response and cancer: Opportunities and challenges. Cell Biosci 2022;12:18. PubMed PMC

Wang H, Liu C, Zhao, Y, et al. . Mitochondria regulation in ferroptosis. Eur J Cell Biol 2020;99:151058. PubMed

Wang L, Yan Z, Vihinen H, et al. . FAM92A1 is a BAR domain protein required for mitochondrial ultrastructure and function. J Cell Biol 2019b;218:97–111. PubMed PMC

Warnau J, Sharma V, Gamiz-Hernandez AP, et al. . Redox-coupled quinone dynamics in the respiratory complex I. Proc Natl Acad Sci U S A 2018;115:E8413–E8420. PubMed PMC

Warnsmann V, Marschall LM, Meeßen AC, et al. . Disruption of the MICOS complex leads to an aberrant cristae structure and an unexpected, pronounced lifespan extension in Podospora anserina. J Cell Biochem 2022;123:1306–1326. PubMed

Warnsmann V, Marschall LM, Osiewacz HD. Impaired F1Fo-ATP-synthase dimerization leads to the induction of cyclophilin D-mediated autophagy-dependent cell death and accelerated aging. Cells 2021;10:757. PubMed PMC

Wasiak S, Zunino R, Mcbride HM. Bax/Bak promote sumoylation of DRP1 and its stable association with mitochondria during apoptotic cell death. J Cell Biol 2007;177:439–450. PubMed PMC

Wasilewski M, Semenzato M, Rafelski SM, et al. . Optic atrophy 1-dependent mitochondrial remodeling controls steroidogenesis in trophoblasts. Curr Biol 2012;22:1228–1234. PubMed PMC

Watkins G, Douglas-Jones A, Mansel, RE, et al. . The localisation and reduction of nuclear staining of PPARgamma and PGC-1 in human breast cancer. Oncol Rep 2004;12:483–488. PubMed

Watson MA, Pattavina B, Hilsabeck TAU, et al. . S3QELs protect against diet-induced intestinal barrier dysfunction. Aging Cell 2021;20:e13476. PubMed PMC

Waypa GB, Marks JD, Guzy R, et al. . Hypoxia triggers subcellular compartmental redox signaling in vascular smooth muscle cells. Circ Res 2010;106:526–535. PubMed PMC

Weinberg SE, Singer BD, Steinert EM, et al. . Mitochondrial complex III is essential for suppressive function of regulatory T cells. Nature 2019;565:495–499. PubMed PMC

Weissert V, Rieger B, Morris S, et al. . Inhibition of the mitochondrial ATPase function by IF1 changes the spatiotemporal organization of ATP synthase. Biochim Biophys Acta Bioenerg 2021;1862:148322. PubMed PMC

Welt K, Weiss J, Martin R, et al. . Ultrastructural, immunohistochemical and biochemical investigations of the rat liver exposed to experimental diabetes und acute hypoxia with and without application of Ginkgo extract. Exp Toxicol Pathol 2004;55:331–345. PubMed

Wilkens V, Kohl W, Busch K. Restricted diffusion of OXPHOS complexes in dynamic mitochondria delays their exchange between cristae and engenders a transitory mosaic distribution. J Cell Sci 2013;126:103–116. PubMed

Wolf DM, Segawa M, Kondadi AK, et al. . Individual cristae within the same mitochondrion display different membrane potentials and are functionally independent. EMBO J 2019;38:e101056. PubMed PMC

Wollstein C, Winterhalter M, Funari SS. The location of coenzyme Q10 in phospholipid membranes made of POPE: A small-angle synchrotron X-ray diffraction study. Eur Biophys J 2015;44:373–381. PubMed

Wong HS, Mezera V, Dighe P, et al. . Superoxide produced by mitochondrial site I(Q) inactivates cardiac succinate dehydrogenase and induces hepatic steatosis in Sod2 knockout mice. Free Radic Biol Med 2021;164:223–232. PubMed

Wright JJ, Fedor JG, Hirst J, et al. . Using a chimeric respiratory chain and EPR spectroscopy to determine the origin of semiquinone species previously assigned to mitochondrial complex I. BMC Biol 2020;18:54. PubMed PMC

Wu B, Li J, Ni H, et al. . TLR4 activation promotes the progression of experimental autoimmune myocarditis to dilated cardiomyopathy by inducing mitochondrial dynamic imbalance. Oxid Med Cell Longev 2018;2018:3181278. PubMed PMC

Xue RQ, Zhao M, Wu Q, et al. . Regulation of mitochondrial cristae remodelling by acetylcholine alleviates palmitate-induced cardiomyocyte hypertrophy. Free Radic Biol Med 2019;145:103–117. PubMed

Xue W, Wang X, Tang H, et al. . Vitexin attenuates myocardial ischemia/reperfusion injury in rats by regulating mitochondrial dysfunction induced by mitochondrial dynamics imbalance. Biomed Pharmacother 2020;124:109849. PubMed

Yamaguchi R, Lartigue L, Perkins G, et al. . Opa1-mediated cristae opening is Bax/Bak and BH3 dependent, required for apoptosis, and independent of Bak oligomerization. Mol Cell 2008;31:557–569. PubMed PMC

Yang RF, Sun LH, Zhang R, et al. . Suppression of Mic60 compromises mitochondrial transcription and oxidative phosphorylation. Sci Rep 2015;5:7990. PubMed PMC

Yang X, Lu GP, Cai XD, et al. . Alterations of complex IV in the tissues of a septic mouse model. Mitochondrion 2019;49:89–96. PubMed

Yuan S, Schmidt HM, Wood KC, et al. . CoenzymeQ in cellular redox regulation and clinical heart failure. Free Radic Biol Med 2021;167:321–334. PubMed

Zamberlan M, Boeckx A, Muller F, et al. . Inhibition of the mitochondrial protein Opa1 curtails breast cancer growth. J Exp Clin Cancer Res 2022;41:95. PubMed PMC

Zaninello M, Palikaras K, Sotiriou A, et al. . Sustained intracellular calcium rise mediates neuronal mitophagy in models of autosomal dominant optic atrophy. Cell Death Differ 2022;29:167–177. PubMed PMC

Zeharia A, Friedman JR, Tobar A, et al. . Mitochondrial hepato-encephalopathy due to deficiency of QIL1/MIC13 (C19orf70), a MICOS complex subunit. Eur J Hum Genet 2016;24:1778–1782. PubMed PMC

Zepeda AB, Pessoa A Jr., Castillo RL, et al. . Cellular and molecular mechanisms in the hypoxic tissue: Role of HIF-1 and ROS. Cell Biochem Funct 2013;31:451–459. PubMed

Zerbes RM, Bohnert M, Stroud DA, et al. . Role of MINOS in mitochondrial membrane architecture: Cristae morphology and outer membrane interactions differentially depend on mitofilin domains. J Mol Biol 2012;422:183–191. PubMed

Zeviani M, Carelli V. Mitochondrial retinopathies. Int J Mol Sci 2021;23:210. PubMed PMC

Zhang D, Zhang Y, Ma J, et al. . Cryo-EM structures of S-OPA1 reveal its interactions with membrane and changes upon nucleotide binding. Elife 2020a;9:e50294. PubMed PMC

Zhang J, Frerman FE, Kim JJ. Structure of electron transfer flavoprotein-ubiquinone oxidoreductase and electron transfer to the mitochondrial ubiquinone pool. Proc Natl Acad Sci U S A 2006;103:16212–16217. PubMed PMC

Zhang J, Liu X, Liang X, et al. . A novel ADOA-associated OPA1 mutation alters the mitochondrial function, membrane potential, ROS production and apoptosis. Sci Rep 2017;7:5704. PubMed PMC

Zhang Y, Hu M, Jia W, et al. . Hyperandrogenism and insulin resistance modulate gravid uterine and placental ferroptosis in PCOS-like rats. J Endocrinol 2020b;246:247–263. PubMed

Zhang Z, Wakabayashi N, Wakabayashi J, et al. . The dynamin-related GTPase Opa1 is required for glucose-stimulated ATP production in pancreatic beta cells. Mol Biol Cell 2011;22:2235–2245. PubMed PMC

Zhu L, Zhou Q, He L, et al. . Mitochondrial unfolded protein response: An emerging pathway in human diseases. Free Radic Biol Med 2021;163:125–134. PubMed

Zick M, Rabl R, Reichert AS. Cristae formation-linking ultrastructure and function of mitochondria. Biochim Biophys Acta 2009;1793:5–19. PubMed

Ziegler M, Monné M, Nikiforov A, et al. . Welcome to the family: Identification of the NAD+ transporter of animal mitochondria as member of the solute carrier family SLC25. Biomolecules 2021;11:880. PubMed PMC

Nejnovějších 20 citací...

Zobrazit více v
Medvik | PubMed

Mitochondrial Physiology of Cellular Redox Regulations

. 2024 Aug 30 ; 73 (S1) : S217-S242. [epub] 20240422

Pitfalls of Mitochondrial Redox Signaling Research

. 2023 Aug 31 ; 12 (9) : . [epub] 20230831

Najít záznam

Citační ukazatele

Nahrávání dat ...

Možnosti archivace

Nahrávání dat ...