Microtubules, built from heterodimers of α- and β-tubulins, control cell shape, mediate intracellular transport, and power cell division. The concentration of αβ-tubulins is tightly controlled through a posttranscriptional mechanism involving selective and regulated degradation of tubulin-encoding mRNAs. Degradation is initiated by TTC5, which recognizes tubulin-synthesizing ribosomes and recruits downstream effectors to trigger mRNA deadenylation. Here, we investigate how cells regulate TTC5 activity. Biochemical and structural proteomic approaches reveal that under normal conditions, soluble αβ-tubulins bind to and sequester TTC5, preventing it from engaging nascent tubulins at translating ribosomes. We identify the flexible C-terminal tail of TTC5 as a molecular switch, toggling between soluble αβ-tubulin-bound and nascent tubulin-bound states. Loss of sequestration by soluble αβ-tubulins constitutively activates TTC5, leading to diminished tubulin mRNA levels and compromised microtubule-dependent chromosome segregation during cell division. Our findings provide a paradigm for how cells regulate the activity of a specificity factor to adapt posttranscriptional regulation of gene expression to cellular needs.

• MeSH
• lidé MeSH
• messenger RNA * metabolismus   genetika   MeSH
• mikrotubuly * metabolismus   MeSH
• proteiny asociované s mikrotubuly metabolismus   genetika   MeSH
• ribozomy metabolismus   MeSH
• segregace chromozomů MeSH
• stabilita RNA * MeSH
• tubulin * metabolismus   genetika   MeSH
• vazba proteinů MeSH
• Check Tag
• lidé MeSH
• Publikační typ
• časopisecké články MeSH
• Názvy látek
• messenger RNA * MeSH
• proteiny asociované s mikrotubuly MeSH
• tubulin * MeSH

Tardigrades are microscopic ecdysozoans that can withstand extreme environmental conditions. Several tardigrade species undergo reversible morphological transformations and enter into cryptobiosis, which helps them to survive periods of unfavorable environmental conditions. However, the underlying molecular mechanisms of cryptobiosis are mostly unknown. Tubulins are evolutionarily conserved components of the microtubule cytoskeleton that are crucial in many cellular processes. We hypothesize that microtubules are necessary for the morphological changes associated with successful cryptobiosis. The molecular composition of the microtubule cytoskeleton in tardigrades is unknown. Therefore, we analyzed and characterized tardigrade tubulins and identified 79 tardigrade tubulin sequences in eight taxa. We found three α-, seven β-, one γ-, and one ε-tubulin isoform. To verify in silico identified tardigrade tubulins, we also isolated and sequenced nine out of ten predicted Hypsibius exemplaris tubulins. All tardigrade tubulins were localized as expected when overexpressed in mammalian cultured cells: to the microtubules or to the centrosomes. The presence of a functional ε-tubulin, clearly localized to centrioles, is attractive from a phylogenetic point of view. Although the phylogenetically close Nematoda lost their δ- and ε-tubulins, some groups of Arthropoda still possess them. Thus, our data support the current placement of tardigrades into the Panarthropoda clade.

• MeSH
• fylogeneze * MeSH
• Tardigrada * klasifikace   MeSH
• tubulin genetika   MeSH
• zvířata MeSH
• Check Tag
• zvířata MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH
• Názvy látek
• tubulin MeSH

Almost half of all individuals affected by intellectual disability (ID) remain undiagnosed. In the Solve-RD project, exome sequencing (ES) datasets from unresolved individuals with (syndromic) ID (n = 1,472 probands) are systematically reanalyzed, starting from raw sequencing files, followed by genome-wide variant calling and new data interpretation. This strategy led to the identification of a disease-causing de novo missense variant in TUBB3 in a girl with severe developmental delay, secondary microcephaly, brain imaging abnormalities, high hypermetropia, strabismus and short stature. Interestingly, the TUBB3 variant could only be identified through reanalysis of ES data using a genome-wide variant calling approach, despite being located in protein coding sequence. More detailed analysis revealed that the position of the variant within exon 5 of TUBB3 was not targeted by the enrichment kit, although consistent high-quality coverage was obtained at this position, resulting from nearby targets that provide off-target coverage. In the initial analysis, variant calling was restricted to the exon targets ± 200 bases, allowing the variant to escape detection by the variant calling algorithm. This phenomenon may potentially occur more often, as we determined that 36 established ID genes have robust off-target coverage in coding sequence. Moreover, within these regions, for 17 genes (likely) pathogenic variants have been identified before. Therefore, this clinical report highlights that, although compute-intensive, performing genome-wide variant calling instead of target-based calling may lead to the detection of diagnostically relevant variants that would otherwise remain unnoticed.

• Klíčová slova
• ERN ITHACA, Exome sequencing, Genome-wide variant calling, Solve-RD, TUBB3,
• MeSH
• lidé MeSH
• mentální retardace genetika   MeSH
• mikrocefalie genetika   MeSH
• missense mutace MeSH
• mladiství MeSH
• mozek abnormality   MeSH
• obličej abnormality   MeSH
• sekvenování exomu MeSH
• strabismus genetika   MeSH
• tubulin genetika   MeSH
• vývojové poruchy u dětí genetika   MeSH
• Check Tag
• lidé MeSH
• mladiství MeSH
• ženské pohlaví MeSH
• Publikační typ
• časopisecké články MeSH
• kazuistiky MeSH
• Názvy látek
• TUBB3 protein, human MeSH Prohlížeč
• tubulin MeSH

UNLABELLED: Arthroderma is the most diverse genus among dermatophytes encompassing species occurring in soil, caves, animal burrows, clinical material and other environments. In this study, we collected ex-type, reference and authentic strains of all currently accepted Arthroderma species and generated sequences of three highly variable loci (ITS rDNA, β-tubulin, and translation elongation factor 1-α). The number of accepted species was expanded to 27. One novel species, A. melbournense (ex-type strain CCF 6162T = CBS 145858T), is described. This species was isolated from toenail dust collected by a podiatrist in Melbourne, during an epidemiological study of four geographical regions of Eastern Australia. Trichophyton terrestre, Chrysosporium magnisporum, and Chrysosporium oceanitis are transferred to Arthroderma. Typification is provided for T. terrestre that is not conspecific with any of the supposed biological species from the former T. terrestre complex, that is, A. insingulare, A. lenticulare and A. quadrifidum. A multi-gene phylogeny and reference sequences provided in this study should serve as a basis for future phylogenetic studies and facilitate species identification in practice. LAY ABSTRACT: The genus Arthroderma encompasses geophilic dermatophyte species that infrequently cause human and animal superficial infections. Reference sequences from three genetic loci were generated for all currently accepted Arthroderma species and phylogeny was constructed. Several taxonomic novelties are introduced. The newly provided data will facilitate species identification and future taxonomic studies.

• Klíčová slova
• Arthroderma, Trichophyton terrestre, geophilic dermatophytes, keratinophilic fungi, multigene phylogeny,
• MeSH
• Arthrodermataceae klasifikace   genetika   MeSH
• DNA fungální genetika   MeSH
• elongační faktor 1 genetika   MeSH
• fylogeneze * MeSH
• geny hub genetika   MeSH
• lidé MeSH
• mezerníky ribozomální DNA genetika   MeSH
• Microsporum klasifikace   genetika   MeSH
• Trichophyton klasifikace   genetika   MeSH
• tubulin genetika   MeSH
• Check Tag
• lidé MeSH
• Publikační typ
• časopisecké články MeSH
• Geografické názvy
• Austrálie MeSH
• Názvy látek
• DNA fungální MeSH
• elongační faktor 1 MeSH
• mezerníky ribozomální DNA MeSH
• tubulin MeSH

Fluorescent nanodiamonds (NDs) coated with therapeutics and cell-targeting structures serve as effective tools for drug delivery. However, NDs circulating in blood can eventually interact with the blood-brain barrier, resulting in undesired pathology. Here, we aimed to detect interaction between NDs and adult brain tissue. First, we cultured neuronal tissue with ND ex vivo and studied cell prosperity, regeneration, cytokine secretion, and nanodiamond uptake. Then, we applied NDs systemically into C57BL/6 animals and assessed accumulation of nanodiamonds in brain tissue and cytokine response. We found that only non-neuronal cells internalized coated nanodiamonds and responded by excretion of interleukin-6 and interferon-γ. Cells of neuronal origin expressing tubulin beta-III did not internalize any NDs. Once we applied coated NDs intravenously, we found no presence of NDs in the adult cortex but observed transient release of interleukin-1α. We conclude that specialized adult neuronal cells do not internalize plain or coated NDs. However, coated nanodiamonds interact with non-neuronal cells present within the cortex tissue. Moreover, the coated NDs do not cross the blood-brain barrier but they interact with adjacent barrier cells and trigger a temporary cytokine response. This study represents the first report concerning interaction of NDs with adult brain tissue.

• MeSH
• biokompatibilní potahované materiály chemie   farmakologie   MeSH
• interferon gama metabolismus   MeSH
• interleukin-6 metabolismus   MeSH
• kultivované buňky MeSH
• mozek patologie   MeSH
• myši inbrední C57BL MeSH
• myši MeSH
• nanodiamanty chemie   toxicita   MeSH
• neurony cytologie   účinky léků   metabolismus   MeSH
• regenerace účinky léků   MeSH
• tubulin genetika   metabolismus   MeSH
• zvířata MeSH
• Check Tag
• myši MeSH
• zvířata MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH
• Názvy látek
• biokompatibilní potahované materiály MeSH
• interferon gama MeSH
• interleukin-6 MeSH
• nanodiamanty MeSH
• tubulin MeSH

γ-Tubulin is associated with microtubule nucleation, but evidence is accumulating in eukaryotes that it also functions in nuclear processes and in cell division control independently of its canonical role. We found that in Arabidopsis thaliana, γ-tubulin interacts specifically with E2FA, E2FB, and E2FC transcription factors both in vitro and in vivo. The interaction of γ-tubulin with the E2Fs is not reduced in the presence of their dimerization partners (DPs) and, in agreement, we found that γ-tubulin interaction with E2Fs does not require the dimerization domain. γ-Tubulin associates with the promoters of E2F-regulated cell cycle genes in an E2F-dependent manner, probably in complex with the E2F-DP heterodimer. The up-regulation of E2F target genes PCNA, ORC2, CDKB1;1, and CCS52A under γ-tubulin silencing suggests a repressive function for γ-tubulin at G1/S and G2/M transitions, and the endocycle, which is consistent with an excess of cell division in some cells and enhanced endoreduplication in others in the shoot and young leaves of γ-tubulin RNAi plants. Altogether, our data show ternary interaction of γ-tubulin with the E2F-DP heterodimer and suggest a repressive role for γ-tubulin with E2Fs in controlling mitotic activity and endoreduplication during plant development.

• Klíčová slova
• Arabidopsis, E2F transcription factors, endoreduplication, gene expression, proliferation, γ-tubulin,
• MeSH
• Arabidopsis * genetika   metabolismus   MeSH
• proteiny buněčného cyklu MeSH
• proteiny huseníčku * genetika   metabolismus   MeSH
• regulace genové exprese u rostlin MeSH
• transkripční faktory E2F * genetika   metabolismus   MeSH
• tubulin * genetika   MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH
• Názvy látek
• E2Fb protein, Arabidopsis MeSH Prohlížeč
• proteiny buněčného cyklu MeSH
• proteiny huseníčku * MeSH
• transkripční faktory E2F * MeSH
• tubulin * MeSH

Highly conserved α- and β-tubulin heterodimers assemble into dynamic microtubules and perform multiple important cellular functions such as structural support, pathway for transport and force generation in cell division. Tubulin exists in different forms of isotypes expressed by specific genes with spatially- and temporally-regulated expression levels. Some tubulin isotypes are differentially expressed in normal and neoplastic cells, providing a basis for cancer chemotherapy drug development. Moreover, specific tubulin isotypes are overexpressed and localized in the nuclei of cancer cells and/or show bioenergetic functions through the regulation of the permeability of mitochondrial ion channels. It has also become clear that tubulin isotypes are involved in multiple cellular functions without being incorporated into microtubule structures. Understanding the mutations of tubulin isotypes specifically expressed in tumors and their post-translational modifications might help to identify precise molecular targets for the design of novel anti-microtubular drugs. Knowledge of tubulin mutations present in tubulinopathies brings into focus cellular functions of tubulin in brain pathologies such as Alzheimer's disease. Uncovering signaling pathways which affect tubulin functions during antigen-mediated activation of mast cells presents a major challenge in developing new strategies for the treatment of inflammatory and allergic diseases. γ-tubulin, a conserved member of the eukaryotic tubulin superfamily specialized for microtubule nucleation is a target of cell cycle and stress signaling. Besides its microtubule nucleation role, γ-tubulin functions in nuclear and cell cycle related processes. This special issue "Tubulin: Structure, Functions and Roles in Disease" contains eight articles, five of which are original research papers and three are review papers that cover diverse areas of tubulin biology and functions under normal and pathological conditions.

• Klíčová slova
• cancer regulation, chemotherapy drugs, isoforms, microtubules, tubulin,
• MeSH
• Alzheimerova nemoc genetika   metabolismus   patologie   MeSH
• lidé MeSH
• mikrotubuly genetika   metabolismus   patologie   MeSH
• mutace MeSH
• nádorové proteiny genetika   metabolismus   MeSH
• nádory genetika   metabolismus   MeSH
• protein - isoformy MeSH
• tubulin genetika   metabolismus   MeSH
• zvířata MeSH
• Check Tag
• lidé MeSH
• zvířata MeSH
• Publikační typ
• práce podpořená grantem MeSH
• úvodní články MeSH
• úvodníky MeSH
• Názvy látek
• nádorové proteiny MeSH
• protein - isoformy MeSH
• tubulin MeSH

Fungi under the order Ophiostomatales (Ascomycota) are known to associate with various species of bark beetles (Coleoptera: Curculionidae: Scolytinae). In addition this group of fungi contains many taxa that can impart blue-stain on sapwood and some are important tree pathogens. A recent survey that focussed on the diversity of the Ophiostomatales in the forest ecosystems of the Czech Republic and Poland uncovered four putative new species. Phylogenetic analyses of four gene regions (ITS1-5.8S-ITS2 region, ß-tubulin, calmodulin, and translation elongation factor 1-α) indicated that these four species are members of the genus Ophiostoma. All four newly described species can be distinguished from each other and from closely related species based on DNA sequence comparisons, morphological characters, growth rates, and their insect associations. Based on this study four new taxa can be circumscribed and the following names are provided: Ophiostoma pityokteinis sp. nov., Ophiostoma rufum sp. nov., Ophiostoma solheimii sp. nov., and Ophiostoma taphrorychi sp. nov. O. rufum sp. nov. is a member of the Ophiostoma piceae species complex, while O. pityokteinis sp. nov. resides in a discrete lineage within Ophiostoma s. stricto. O. taphrorychi sp. nov. together with O. distortum formed a well-supported clade in Ophiostoma s. stricto close to O. pityokteinis sp. nov. O. solheimii sp. nov. groups within a currently undefined lineage A, which also includes Ophiostoma grandicarpum and Ophiostoma microsporum. This study highlights the need for more intensive surveys that should include additional countries of Central Europe, insect vectors and host tree species in order to elucidate Ophiostoma species diversity in this region.

• Klíčová slova
• 4 New taxa, Conifers, Hardwoods, Ophiostoma piceae species complex,
• MeSH
• cévnaté rostliny parazitologie   MeSH
• dřevo parazitologie   MeSH
• elongační faktor 1 genetika   MeSH
• fylogeneze * MeSH
• kalmodulin genetika   MeSH
• mezerníky ribozomální DNA genetika   MeSH
• mykologické určovací techniky MeSH
• nosatcovití růst a vývoj   mikrobiologie   MeSH
• Ophiostoma klasifikace   genetika   izolace a purifikace   fyziologie   MeSH
• RNA ribozomální 5.8S genetika   MeSH
• sekvenční analýza DNA MeSH
• tubulin genetika   MeSH
• zvířata MeSH
• Check Tag
• zvířata MeSH
• Publikační typ
• časopisecké články MeSH
• Geografické názvy
• Česká republika MeSH
• Polsko MeSH
• Názvy látek
• elongační faktor 1 MeSH
• kalmodulin MeSH
• mezerníky ribozomální DNA MeSH
• RNA ribozomální 5.8S MeSH
• tubulin MeSH

Colletotrichum species are known as important pathogens of plants with an impact on crop production. Some of these species are also known as a cause of rare ophthalmic infections in humans. A case of keratitis caused by Colletotrichum dematium after corneal trauma in a 56-year-old woman is presented. Infection was diagnosed based on positive microscopy and culture. The fungal isolate was identified by morphological characteristics and DNA sequencing of the ITS rDNA region, β-tubulin (tub2) and glyceraldehyde-3-phosphate dehydrogenase (gapdh) genes. The patient responded well to topical therapy with amphotericin B combined with intravenous amphotericin B but improvement was associated with the corneal collagen cross-linking. The review of the literature revealed another 13 cases of C. dematium keratitis, all but one patient having at least one keratitis risk factor in their history. Almost all patients (n = 12) were treated with topical polyene antibiotics (natamycin or amphotericin B), improvement and cure were achieved in eight of them.

• Klíčová slova
• Coelomycetous fungi, Colletotrichum dematium, Corneal collagen cross-linking, Glomerella, Keratomycosis, Molecular identification, Therapy,
• MeSH
• amfotericin B aplikace a dávkování   MeSH
• antifungální látky aplikace a dávkování   MeSH
• aplikace lokální MeSH
• Colletotrichum klasifikace   genetika   izolace a purifikace   MeSH
• diagnostické techniky molekulární MeSH
• dospělí MeSH
• glyceraldehyd-3-fosfátdehydrogenasa (fosforylační) genetika   MeSH
• keratitida diagnóza   mikrobiologie   patologie   MeSH
• lidé středního věku MeSH
• lidé MeSH
• mezerníky ribozomální DNA genetika   MeSH
• mikrobiologické techniky MeSH
• mladiství MeSH
• mladý dospělý MeSH
• mykózy diagnóza   mikrobiologie   patologie   MeSH
• poranění oka komplikace   MeSH
• sekvenční analýza DNA MeSH
• tubulin genetika   MeSH
• výsledek terapie MeSH
• Check Tag
• dospělí MeSH
• lidé středního věku MeSH
• lidé MeSH
• mladiství MeSH
• mladý dospělý MeSH
• mužské pohlaví MeSH
• ženské pohlaví MeSH
• Publikační typ
• časopisecké články MeSH
• kazuistiky MeSH
• systematický přehled MeSH
• Názvy látek
• amfotericin B MeSH
• antifungální látky MeSH
• glyceraldehyd-3-fosfátdehydrogenasa (fosforylační) MeSH
• mezerníky ribozomální DNA MeSH
• tubulin MeSH

De novo heterozygous missense variants in the γ-tubulin gene TUBG1 have been linked to human malformations of cortical development associated with intellectual disability and epilepsy. Here, we investigated through in-utero electroporation and in-vivo studies, how four of these variants affect cortical development. We show that TUBG1 mutants affect neuronal positioning, disrupting the locomotion of new-born neurons but without affecting progenitors' proliferation. We further demonstrate that pathogenic TUBG1 variants are linked to reduced microtubule dynamics but without major structural nor functional centrosome defects in subject-derived fibroblasts. Additionally, we developed a knock-in Tubg1Y92C/+ mouse model and assessed consequences of the mutation. Although centrosomal positioning in bipolar neurons is correct, they fail to initiate locomotion. Furthermore, Tubg1Y92C/+ animals show neuroanatomical and behavioral defects and increased epileptic cortical activity. We show that Tubg1Y92C/+ mice partially mimic the human phenotype and therefore represent a relevant model for further investigations of the physiopathology of cortical malformations.

• MeSH
• centrozom metabolismus   MeSH
• chování zvířat MeSH
• elektronová mikroskopie MeSH
• embryo savčí MeSH
• epilepsie genetika   MeSH
• fibroblasty cytologie   metabolismus   ultrastruktura   MeSH
• genetická predispozice k nemoci MeSH
• genový knockin MeSH
• HeLa buňky MeSH
• intravitální mikroskopie MeSH
• konfokální mikroskopie MeSH
• lidé MeSH
• malformace mozkové kůry genetika   MeSH
• mikrotubuly genetika   metabolismus   MeSH
• missense mutace MeSH
• modely nemocí na zvířatech MeSH
• mozková kůra abnormality   cytologie   diagnostické zobrazování   MeSH
• myši transgenní MeSH
• myši MeSH
• neurogeneze genetika   MeSH
• neurony fyziologie   MeSH
• pohyb buněk genetika   MeSH
• tubulin genetika   MeSH
• zvířata MeSH
• Check Tag
• lidé MeSH
• mužské pohlaví MeSH
• myši MeSH
• ženské pohlaví MeSH
• zvířata MeSH
• Publikační typ
• audiovizuální média MeSH
• časopisecké články MeSH
• práce podpořená grantem MeSH
• Názvy látek
• TUBG1 protein, human MeSH Prohlížeč
• TUBG1 protein, mouse MeSH Prohlížeč
• tubulin MeSH