SPD (several plastic deformations) methods make it possible to obtain an ultrafine-grained structure (UFG) in larger volumes of material and thus improve its mechanical properties. The presented work focuses on the structural and mechanical changes of aluminium alloy AlMgSi0.5 (EN AW 6060) during processing by repeated extrusion through the ECAP rectangular channel. After a four-pass extrusion, the samples' microstructures were observed using an optical microscope, where refinement of the material grains was confirmed. Tensile tests determined the extrusion forces and allowed interpretation of the changes in the mechanical properties of the stressed alloy. The grain size was refined from 28.90 μm to 4.63 μm. A significant improvement in the strength of the material (by 45%) and a significant deterioration in ductility (to 60%) immediately after the first extrusion was confirmed. The third pass through the die appeared to be optimal for the chosen deformation path, while after the fourth pass, micro-cracks appeared, significantly reducing the strength of the material. Based on the measurement results, new analytical equations were formulated to predict the magnitude or intensity of the volumetric and shape deformations of the structural grain size and, in particular, the adequate increase in the strength and yield point of the material.

• Keywords
• aluminium alloy, intensive plastic deformation method, mechanical properties, microstructure,
• Publication type
• Journal Article MeSH

The formulation of the Hall-Petch relationship in the early 1950s has raised immense interest in studying the influence of the grain size of solid materials on their properties. Grain refinement can be achieved through extreme deformation. In the presented study, Equal-Channel Angular Pressing (ECAP) was successfully applied to produce an ultrafine-grained microstructure in a pure commercial Cu of 99.9 wt%. Samples were processed by ECAP at 21 °C for six passes via route A. A new equation of equilibrium that allows the exact determination of the number of extrusions and other technological parameters required to achieve the desired final grain size has been developed. The presented research also deals, in a relatively detailed and comparative way, with the use of ultrasound. In this context, a very close correlation between the process functions of extrusion and the speed of longitudinal ultrasonic waves was confirmed.

• Keywords
• ECAP, copper, extrusion, grain size, structural and mechanical changes,
• Publication type
• Journal Article MeSH

The aortic and pulmonary allograft heart valves (AHV) are used in the cardiac surgery for replacing the impaired semilunar valves. They are harvested from donor hearts and cryostored in tissue banks. The expiration period was set to 5 years arbitrarily. We hypothesized that their mechanical and structural properties do not deteriorate after this period. A total of 64 human AHV (31 aortic and 33 pulmonary) of different length of cryopreservation (fresh, 0-5, 5-10, over 10 years) were sampled to different tissue strips (artery, leaflet, ventriculo-arterial junction) and tested by tensile test with loading velocity 10 mm/min until tissue rupture. Neighbouring regions of tissue were processed histologically and evaluated for elastin and collagen area fraction. The results were evaluated statistically. In aortic AHV, the physical deformation response of wall samples to stress did not changed significantly neither during the process of cryopreservation nor during the first 10 years of storage. In pulmonary AHV, the ultimate strain dropped after 5 years of cryopreservation indicating that pulmonary artery was significantly less deformable at the time of rupture. On the other hand, the ultimate stress was equal during the first 10 years of cryostorage. The changes in collagen and elastin amount in the tissue samples were not associated with mechanical impairment. Neither elasticity, stiffness and solidity nor morphology of aortic and pulmonary AHV did not change reasonably with cryopreservation and in the first 10 years of cryostorage. This evidence suggests that the expiration period might be extended in the future.

• Keywords
• Cryopreservation, Heart valve allograft, Homograft, Mechanical characteristics, Structural changes, Tissue banking,
• MeSH
• Aortic Valve transplantation   MeSH
• Adult MeSH
• Elastin analysis   MeSH
• Transplantation, Homologous MeSH
• Collagen analysis   MeSH
• Cryopreservation methods   MeSH
• Middle Aged MeSH
• Humans MeSH
• Pulmonary Valve transplantation   MeSH
• Tissue Banks * MeSH
• Check Tag
• Adult MeSH
• Middle Aged MeSH
• Humans MeSH
• Male MeSH
• Female MeSH
• Publication type
• Journal Article MeSH
• Names of Substances
• Elastin MeSH
• Collagen MeSH

Chronic pain is associated with time-dependent structural and functional reorganization of the prefrontal cortex that may reflect adaptive pain compensatory and/or maladaptive pain-promoting mechanisms. However, the molecular underpinnings of these changes and whether there are time-dependent relationships to pain progression are not well characterized. In this study, we analyzed protein composition in the medial prefrontal cortex (mPFC) of rats at two timepoints after spinal nerve ligation (SNL) using two-dimensional gel electrophoresis (2D-ELFO) and liquid chromatography with tandem mass spectrometry (LC-MS/MS). SNL, but not sham-operated, rats developed persistent tactile allodynia and thermal hyperalgesia, confirming the presence of experimental neuropathic pain. Two weeks after SNL (early timepoint), we identified 11 proteins involved in signal transduction, protein transport, cell homeostasis, metabolism, and apoptosis, as well as heat-shock proteins and chaperones that were upregulated by more than 1.5-fold compared to the sham-operated rats. Interestingly, there were only four significantly altered proteins identified at 8 weeks after SNL (late timepoint). These findings demonstrate extensive time-dependent modifications of protein expression in the rat mPFC under a chronic neuropathic pain state that might underlie the evolution of chronic pain characterized by early pain-compensatory and later aberrant mechanisms.

• Keywords
• affective dimension of pain, neuropathic pain, pain chronification, prefrontal cortex, proteomics,
• MeSH
• Time Factors MeSH
• Chromatography, Liquid MeSH
• Hyperalgesia etiology   metabolism   MeSH
• Rats MeSH
• Pain Measurement MeSH
• Spinal Nerves injuries   MeSH
• Neuralgia etiology   metabolism   MeSH
• Rats, Sprague-Dawley MeSH
• Prefrontal Cortex metabolism   MeSH
• Proteomics methods   MeSH
• Gene Expression Regulation MeSH
• Tandem Mass Spectrometry MeSH
• Animals MeSH
• Check Tag
• Rats MeSH
• Male MeSH
• Animals MeSH
• Publication type
• Journal Article MeSH

Guanine quadruplex (GQ) is a noncanonical nucleic acid structure formed by guanine-rich DNA and RNA sequences. Folding of GQs is a complex process, where several aspects remain elusive, despite being important for understanding structure formation and biological functions of GQs. Pulling experiments are a common tool for acquiring insights into the folding landscape of GQs. Herein, we applied a computational pulling strategy─steered molecular dynamics (SMD) simulations─in combination with standard molecular dynamics (MD) simulations to explore the unfolding landscapes of tetrameric parallel GQs. We identified anisotropic properties of elastic conformational changes, unfolding transitions, and GQ mechanical stabilities. Using a special set of structural parameters, we found that the vertical component of pulling force (perpendicular to the average G-quartet plane) plays a significant role in disrupting GQ structures and weakening their mechanical stabilities. We demonstrated that the magnitude of the vertical force component depends on the pulling anchor positions and the number of G-quartets. Typical unfolding transitions for tetrameric parallel GQs involve base unzipping, opening of the G-stem, strand slippage, and rotation to cross-like structures. The unzipping was detected as the first and dominant unfolding event, and it usually started at the 3'-end. Furthermore, results from both SMD and standard MD simulations indicate that partial spiral conformations serve as a transient ensemble during the (un)folding of GQs.

• MeSH
• Biomechanical Phenomena MeSH
• DNA chemistry   MeSH
• G-Quadruplexes * MeSH
• Mechanical Phenomena MeSH
• Molecular Dynamics Simulation * MeSH
• Publication type
• Journal Article MeSH
• Research Support, Non-U.S. Gov't MeSH
• Names of Substances
• DNA MeSH

We present the first Raman spectroscopic study of Bernal bilayer graphene flakes under uniaxial tension. Apart from a purely mechanical behavior in flake regions where both layers are strained evenly, certain effects stem from inhomogeneous stress distribution across the layers. These phenomena such as the removal of inversion symmetry in bilayer graphene may have important implications in the band gap engineering, providing an alternative route to induce the formation of a band gap.

• MeSH
• Phonons * MeSH
• Graphite chemistry   MeSH
• Membranes, Artificial * MeSH
• Molecular Structure MeSH
• Polymers chemistry   MeSH
• Spectrum Analysis, Raman MeSH
• Publication type
• Journal Article MeSH
• Research Support, Non-U.S. Gov't MeSH
• Names of Substances
• Graphite MeSH
• Membranes, Artificial * MeSH
• Polymers MeSH

Encephalization has many contexts and implications. On one hand, it is concerned with the transformation of eating habits, social relationships and communication, cognitive skills and the mind. Along with the increase in brain size on the other hand, encephalization is connected with the creation of more complex brain structures, namely in the cerebral cortex. It is imperative to inquire into the mechanisms which are linked with brain growth and to find out which of these mechanisms allow it and determine it. There exist a number of theories for understanding human brain evolution which originate from neurological sciences. These theories are the concept of radial units, minicolumns, mirror neurons, and neurocognitive networks. Over the course of evolution, it is evident that a whole range of changes have taken place in regards to heredity. These changes include new mutations of genes in the microcephalin complex, gene duplications, gene co-expression, and genomic imprinting. This complex study of the growth and reorganization of the brain and the functioning of hereditary factors and their external influences creates an opportunity to consider the implications of cultural evolution and cognitive faculties.

• MeSH
• Biological Evolution * MeSH
• Cell Differentiation MeSH
• Gene Duplication MeSH
• Humans MeSH
• Brain anatomy & histology   MeSH
• Gene Expression Regulation MeSH
• Check Tag
• Humans MeSH
• Publication type
• Journal Article MeSH
• Review MeSH

The effect of mechanical stress on erythrocytes suspended in various media was studied. The ability of the cells to increase their glucose consumption was found to be the major criterion allowing to divide the media into two groups. In plasma, serum or in Ringer's solution supplemented with albumin and glucose the energy consumption by mechanically stressed erythrocytes increased 20 to 50%; no morphological changes of the cells were observed either in suspension or on Giemsa smears. The cells behaved in the same way in Mg2(+)-free medium. The other group included protein-free medium (Ringer's solution supplemented with glucose) and Ca2(+)-free Ringer's solution supplemented with albumin and glucose; under these conditions erythrocytes were unable to raise their energy consumption in response to mechanical stress, and after some period structural impairment of the membrane could be observed on Giemsa smears. No differences in metabolism-associated nucleotide concentrations (ATP, ADP, NAD, NADP) were observed between the samples. Resealed red cell ghosts with high concentrations of intracellular components were prepared as a model of cells with damaged membrane. In these ghosts (with low ATP concentration) mechanical stress produced increased proportions of echinocytes, even in the "native" suspension. These results have confirmed the vital role of the energy-consuming contractile apparatus in the erythrocyte membrane, and supplied a clue to the role of Ca2+ in its activation and to the influence of extracellular proteins on the maintenance of in red cell shape.

• MeSH
• Erythrocyte Deformability * MeSH
• Energy Metabolism * MeSH
• Erythrocyte Membrane metabolism   ultrastructure   MeSH
• Erythrocytes cytology   drug effects   metabolism   MeSH
• Glucose metabolism   MeSH
• Magnesium pharmacology   MeSH
• Isotonic Solutions MeSH
• Culture Media MeSH
• Humans MeSH
• Stress, Mechanical MeSH
• Nucleotides metabolism   MeSH
• Ringer's Solution MeSH
• Serum Albumin pharmacology   MeSH
• Calcium pharmacology   MeSH
• Check Tag
• Humans MeSH
• Publication type
• Journal Article MeSH
• Names of Substances
• Glucose MeSH
• Magnesium MeSH
• Isotonic Solutions MeSH
• Culture Media MeSH
• Nucleotides MeSH
• Ringer's Solution MeSH
• Serum Albumin MeSH
• Calcium MeSH

Non-isothermal differential scanning calorimetry (DSC) was used to study the influences of particle size (daver) and heating rate (q+) on the structural relaxation, crystal growth and decomposition kinetics of amorphous indomethacin. The structural relaxation and decomposition processes exhibited daver-independent kinetics, with the q+ dependences based on the apparent activation energies of 342 and 106 kJ·mol-1, respectively. The DSC-measured crystal growth kinetics played a dominant role in the nucleation throughout the total macroscopic amorphous-to-crystalline transformation: the change from the zero-order to the autocatalytic mechanism with increasing q+, the significant alteration of kinetics, with the storage below the glass transition temperature, and the accelerated crystallization due to mechanically induced defects. Whereas slow q+ led to the formation of the thermodynamically stable γ polymorph, fast q+ produced a significant amount of the metastable α polymorph. Mutual correlations between the macroscopic and microscopic crystal growth processes, and between the viscous flow and structural relaxation motions, were discussed based on the values of the corresponding activation energies. Notably, this approach helped us to distinguish between particular crystal growth modes in the case of the powdered indomethacin materials. Ediger's decoupling parameter was used to quantify the relationship between the viscosity and crystal growth. The link between the cooperativity of structural domains, parameters of the Tool-Narayanaswamy-Moynihan relaxation model and microscopic crystal growth was proposed.

• Keywords
• DSC, amorphous indomethacin, crystal growth, particle size, structural relaxation, viscous flow,
• MeSH
• Calorimetry, Differential Scanning MeSH
• Indomethacin * chemistry   MeSH
• Crystallization MeSH
• Temperature MeSH
• Transition Temperature MeSH
• Viscosity MeSH
• Publication type
• Journal Article MeSH
• Names of Substances
• Indomethacin * MeSH

Understanding the genetic basis of reproductive isolation is a central issue in the study of speciation. Structural variants (SVs); that is, structural changes in DNA, including inversions, translocations, insertions, deletions, and duplications, are common in a broad range of organisms and have been hypothesized to play a central role in speciation. Recent advances in molecular and statistical methods have identified structural variants, especially inversions, underlying ecologically important traits; thus, suggesting these mutations contribute to adaptation. However, the contribution of structural variants to reproductive isolation between species-and the underlying mechanism by which structural variants most often contribute to speciation-remain unclear. Here, we review (i) different mechanisms by which structural variants can generate or maintain reproductive isolation; (ii) patterns expected with these different mechanisms; and (iii) relevant empirical examples of each. We also summarize the available sequencing and bioinformatic methods to detect structural variants. Lastly, we suggest empirical approaches and new research directions to help obtain a more complete assessment of the role of structural variants in speciation.

• Keywords
• hybridization, reproductive isolation, suppressed recombination,
• MeSH
• Biological Evolution MeSH
• Species Specificity * MeSH
• Phenotype MeSH
• Adaptation, Physiological MeSH
• Humans MeSH
• Evolution, Molecular MeSH
• Reproductive Isolation MeSH
• Genomic Structural Variation genetics   MeSH
• Animals MeSH
• Check Tag
• Humans MeSH
• Animals MeSH
• Publication type
• Journal Article MeSH
• Research Support, Non-U.S. Gov't MeSH
• Review MeSH
• Research Support, U.S. Gov't, Non-P.H.S. MeSH