DNA is the carrier of all cellular genetic information and increasingly used in nanotechnology. Quantitative understanding and optimization of its functions requires precise experimental characterization and accurate modeling of DNA properties. A defining feature of DNA is its helicity. DNA unwinds with increasing temperature, even for temperatures well below the melting temperature. However, accurate quantitation of DNA unwinding under external forces and a microscopic understanding of the corresponding structural changes are currently lacking. Here we combine single-molecule magnetic tweezers measurements with atomistic molecular dynamics and coarse-grained simulations to obtain a comprehensive view of the temperature dependence of DNA twist. Experimentally, we find that DNA twist changes by ΔTw(T) = (-11.0 ± 1.2)°/(°C·kbp), independent of applied force, in the range of forces where torque-induced melting is negligible. Our atomistic simulations predict ΔTw(T) = (-11.1 ± 0.3)°/(°C·kbp), in quantitative agreement with experiments, and suggest that the untwisting of DNA with temperature is predominantly due to changes in DNA structure for defined backbone substates, while the effects of changes in substate populations are minor. Coarse-grained simulations using the oxDNA framework yield a value of ΔTw(T) = (-6.4 ± 0.2)°/(°C·kbp) in semi-quantitative agreement with experiments.
- MeSH
- Erythrocytes physiology MeSH
- Rats MeSH
- Cell Membrane Permeability MeSH
- Temperature MeSH
- Age Factors MeSH
- Animals MeSH
- Check Tag
- Rats MeSH
- Animals MeSH
This study presents results from continuous measurements of stem CO2 efflux carried out for seven experimental seasons (from May to October) in a young Norway spruce forest. The objectives of the study were to determine variability in the response of stem CO2 efflux to stem temperature over the season and to observe differences in the calculated relationship between stem temperature and CO2 efflux based on full growing season data or on data divided into periods according to stem growth rate. Temperature sensitivity of stem CO2 efflux (Q10) calculated for the established periods ranged between 1.61 and 3.46 and varied over the season, with the lowest values occurring in July and August. Q10 calculated using data from the full growing seasons ranged between 2.30 and 2.94 and was often significantly higher than Q10 calculated for the individual periods. Temperature-normalized stem CO2 efflux (R10) determined using Q10 from growing season data was overestimated when the temperature was below 10 °C and underestimated when the temperature was above 10 °C, compared with R10 calculated using Q10 established for the individual periods. The differences in daily mean R10 calculated by these two approaches ranged between -0.9 and 0.2 μmol CO2 m-2 s-1. The results of this study confirm that long periods for determining the temperature dependence of stem CO2 efflux encompass different statuses of the wood (especially in relation to stem growth). This may cause bias in models using this relationship for estimating stem CO2 efflux as a function of temperature.
- MeSH
- Models, Biological MeSH
- Forests MeSH
- Meteorological Concepts MeSH
- Carbon Dioxide metabolism MeSH
- Seasons MeSH
- Picea physiology MeSH
- Plant Stems growth & development metabolism MeSH
- Trees physiology MeSH
- Temperature MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Geographicals
- Czech Republic MeSH
- MeSH
- Adenosine Triphosphatases MeSH
- Animal Experimentation MeSH
- Rats MeSH
- Myocardium MeSH
- Myosins MeSH
- Mice MeSH
- Temperature MeSH
- Check Tag
- Rats MeSH
- Mice MeSH
Whole blood surface tension of 15 healthy subjects recorded by the ring method was investigated in the temperature range from 20 to 40 degrees C. The surface tension omega as a function of temperature t ( degrees C) is described by an equation of linear regression as omega(t) = (-0.473 t + 70.105) x 10(-3) N/m. Blood serum surface tension in the range from 20 to 40 degrees C is described by linear regression equation omega(t) = (-0.368 t + 66.072) x 10(-3) N/m and linear regression function of blood sediment surface tension is omega(t) = (-0.423 t + 67.223) x10(-3) N/m.
In the present work, the adsorption of water was investigated in aqueous normal-phase liquid chromatography on Cogent Silica C and Cogent Phenyl hydride stationary phases at different temperatures by frontal analysis - using coulometric Karl Fischer titration - to compare the temperature dependence of adsorption of water from aqueous acetonitrile. The Cogent Silica-C and Cogent Phenyl Hydride columns have a silicon hydride surface (silica hydride) with less than 2% free silanol group; therefore, they do not have a strong association with water. The adsorption behavior of water on the mentioned stationary phases was modeled by Langmuir isotherm. The preferentially adsorbed water was expressed in terms of a hypothetical monomolecular water layer equivalent in the inner pores. The uptake of water slightly depends on the temperature. The adsorbed water may fill four to eight percent of the pore volume over the studied temperature range, which approximately corresponds to the equivalent of 0.24-0.68 water layer coverage of the adsorbent surface. The phenyl hydride stationary phase shows decreased water uptake in comparison to the Silica C stationary phase.
