spatial pattern
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BACKGROUND: Severe canopy-removing disturbances are native to many temperate forests and radically alter stand structure, but biotic legacies (surviving elements or patterns) can lend continuity to ecosystem function after such events. Poorly understood is the degree to which the structural complexity of an old-growth forest carries over to the next stand. We asked how pre-disturbance spatial pattern acts as a legacy to influence post-disturbance stand structure, and how this legacy influences the structural diversity within the early-seral stand. METHODS: Two stem-mapped one-hectare forest plots in the Czech Republic experienced a severe bark beetle outbreak, thus providing before-and-after data on spatial patterns in live and dead trees, crown projections, down logs, and herb cover. RESULTS: Post-disturbance stands were dominated by an advanced regeneration layer present before the disturbance. Both major species, Norway spruce (Picea abies) and rowan (Sorbus aucuparia), were strongly self-aggregated and also clustered to former canopy trees, pre-disturbance snags, stumps and logs, suggesting positive overstory to understory neighbourhood effects. Thus, although the disturbance dramatically reduced the stand's height profile with ~100% mortality of the canopy layer, the spatial structure of post-disturbance stands still closely reflected the pre-disturbance structure. The former upper tree layer influenced advanced regeneration through microsite and light limitation. Under formerly dense canopies, regeneration density was high but relatively homogeneous in height; while in former small gaps with greater herb cover, regeneration density was lower but with greater heterogeneity in heights. CONCLUSION: These findings suggest that pre-disturbance spatial patterns of forests can persist through severe canopy-removing disturbance, and determine the spatial structure of the succeeding stand. Such patterns constitute a subtle but key legacy effect, promoting structural complexity in early-seral forests as well as variable successional pathways and rates. This influence suggests a continuity in spatial ecosystem structure that may well persist through multiple forest generations.
Animals demonstrate their ability to represent a geometric configuration of their environment and to use this information for spatial decisions in their response space in many situations. In presented experiment, we examined the ability of rats to interpret a configuration of abstract visual stimuli to make spatial decisions in a real response space. We tested whether they are able to interpret spatial configuration of abstract stimuli or whether they perceive such visual stimuli simply as geometric patterns associated to particular spatial choices. The rats were tested in a Skinner box with four nosing holes in the transparent front wall through which a computer screen was visible. According to the visual stimuli on the screen, the rats should choose the appropriate nosing hole to obtain a reward. We compared two groups of rats: the first group was exposed to the visual stimuli designed as a representation of the response space: the position of rewarded nosing hole was shown in relation to other nosing holes. The second group was exposed to one of four geometric patterns associated to one of the four nosing holes but without any implicit information about the response space. The results suggested that rats using the stimuli with information about configuration were significantly more successful than rats trained to respond to visual stimuli unrelated to the geometry of the environment.
- MeSH
- diskriminační učení fyziologie MeSH
- financování organizované MeSH
- krysa rodu rattus MeSH
- pochopení fyziologie MeSH
- potkani Long-Evans MeSH
- prostorové chování fyziologie MeSH
- rozpoznávání obrazu fyziologie MeSH
- výběrové chování fyziologie MeSH
- zraková percepce MeSH
- zvířata MeSH
- Check Tag
- krysa rodu rattus MeSH
- mužské pohlaví MeSH
- zvířata MeSH
- Publikační typ
- srovnávací studie MeSH
The hippocampus plays a crucial role in the formation and retrieval of spatial memory across mammals and episodic memory in humans. Episodic and spatial memories can be retrieved irrespective of the subject's awake behavioral state and independently of its actual spatial context. However, the nature of hippocampal network activity during such out-context retrieval has not been described so far. Theoretically, context-independent spatial memory retrieval suggests a shift of the hippocampal spatial representations from coding the current spatial context to coding the remembered environment. In this study we show in rats that the CA3 neuronal population can switch spontaneously across representations and transiently activate another stored familiar spatial pattern without direct external sensory cuing. This phenomenon qualitatively differs from the well-described sharp wave-related pattern reactivations during immobility. Here, it occurs under the theta oscillatory state during active exploration and reflects the preceding experience of sudden environmental change. The respective out-context coding spikes appeared later in the theta cycle than the in-context ones. Finally, the experience also induced the emergence of population vectors with a co-expression of both codes segregated into different phases of the theta cycle.
- MeSH
- epizodická paměť * MeSH
- hipokampus MeSH
- krysa rodu rattus MeSH
- lidé MeSH
- plži * MeSH
- podněty MeSH
- prostorová paměť MeSH
- rozpomínání MeSH
- savci MeSH
- zvířata MeSH
- Check Tag
- krysa rodu rattus MeSH
- lidé MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
Despite initial expectations, which have emerged with the advancement of computer technology over the last decade of the twentieth century, scientific literature does not contain many relevant references regarding the development and use of innovative items in psychological testing. Our study presents and evaluates two novel item types. One item type is derived from a standard schematic test item used for the assessment of the spatial perception aspect of spatial ability, enhanced by an interactive response module. The performance on this item type is correlated with the performance on its paper and pencil counterpart. The other innovative item type used complex stimuli in the form of a short video of a ride through a city presented in an on-route perspective, which is intended to measure navigation skills and the ability to keep oneself oriented in space. In this case, the scores were related to the capacity of visuo-spatial working memory and also to the overall score in the paper/pencil test of spatial ability. The second relationship was moderated by gender.
- MeSH
- dospělí MeSH
- krátkodobá paměť fyziologie MeSH
- lidé středního věku MeSH
- lidé MeSH
- mladý dospělý MeSH
- neuropsychologické testy MeSH
- prostorová navigace fyziologie MeSH
- psychomotorický výkon fyziologie MeSH
- rozpoznávání obrazu fyziologie MeSH
- světelná stimulace MeSH
- vnímání prostoru fyziologie MeSH
- výběrové chování MeSH
- Check Tag
- dospělí MeSH
- lidé středního věku MeSH
- lidé MeSH
- mladý dospělý MeSH
- mužské pohlaví MeSH
- ženské pohlaví MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
[Economic pattern of life of the stationary population]
Spatial transcriptomics is revolutionizing modern biology, offering researchers an unprecedented ability to unravel intricate gene expression patterns within tissues. From pioneering techniques to newly commercialized platforms, the field of spatial transcriptomics has evolved rapidly, ushering in a new era of understanding across various disciplines, from developmental biology to disease research. This dynamic expansion is reflected in the rapidly growing number of technologies and data analysis techniques developed and introduced. However, the expanding landscape presents a considerable challenge for researchers, especially newcomers to the field, as staying informed about these advancements becomes increasingly complex. To address this challenge, we have prepared an updated review with a particular focus on technologies that have reached commercialization and are, therefore, accessible to a broad spectrum of potential new users. In this review, we present the fundamental principles of spatial transcriptomic methods, discuss the challenges in data analysis, provide insights into experimental considerations, offer information about available resources for spatial transcriptomics, and conclude with a guide for method selection and a forward-looking perspective. Our aim is to serve as a guiding resource for both experienced users and newcomers navigating the complex realm of spatial transcriptomics in this era of rapid development. We intend to equip researchers with the necessary knowledge to make informed decisions and contribute to the cutting-edge research that spatial transcriptomics offers.
- MeSH
- lidé MeSH
- stanovení celkové genové exprese * metody MeSH
- transkriptom * MeSH
- výpočetní biologie metody MeSH
- zvířata MeSH
- Check Tag
- lidé MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- přehledy MeSH
