3-D ultrasonografie jako prostorová rekonstrukce vyšetřovaného orgánu z 2-D ultrasonografických obrazů usnadňuje, zrychluje a zpřesňuje ultrasonografickou d diagnostiku i v urologii. Autor uvádí základní principy prostorové rekonstrukce ultrasonografického obrazu. V urologické diagnostice lze využít přednosti prostorového zobrazení zejména při vyšetření karcinomu prostaty. Výtěžnost má rovněž 3-D ultrasonografie varlete, kde lze přesněji posoudit i jinak obtížně prokazatelné ložiskové změny. Vyšetření ledviny je vzhledem k obtížnější přístupnosti ledviny méně snadné, protože se u některých nemocných nedaří v daném intervalu, určeném pro 3-D snímání, dostatečně ledvinu vyšetřit. Nespornou výhodou je možnost prostorové rekonstrukce cévního zá zásobení. 3-D ultrasonografii je rovněž možné využít k endoluminální endosonografii při vyšetření močového měchýře, uretru, pánvičky a uretry.
3-D ultrasonography, as a spatial reconstruction of an organ examined using 2-D ultrasonographic imageges, facilitates, accelerates and makes precise the ultrasonographic diagnostics even in urology. The basic principles of the spatial imaging of ultrasonography imaging are discussed. m the urolological diagnostics, the advantages of the spatial imaging can 11 be utilized particularly for the examination of the prostatic carcinoma. Good results have been also achieved by the 3-D testicle ultrasonography where the focus changes, Which fail to be identified by other techniques, can be assessed more exactly. The kidney examination is less easy due to the difficult accessibility of kidneys, since with some patients, the kidney cannot be adequately examined 1 within the interval stated for the 3-D scanning. The spatial reconstruaion of blood supply represents an indisputable advantage. 3-D ultrasonography can be also used for thoe endoluminal endosonography when examining the urinary bladder, (renal) pelvis and urethra.
Interaural level difference (ILD) is one of the basic binaural clues in the spatial localization of a sound source. Due to the acoustic shadow cast by the head, a sound source out of the medial plane results in an increased sound level at the nearer ear and a decreased level at the distant ear. In the mammalian auditory brainstem, the ILD is processed by a neuronal circuit of binaural neurons in the lateral superior olive (LSO). These neurons receive major excitatory projections from the ipsilateral side and major inhibitory projections from the contralateral side. As the sound level is encoded predominantly by the neuronal discharge rate, the principal function of LSO neurons is to estimate and encode the difference between the discharge rates of the excitatory and inhibitory inputs. Two general mechanisms of this operation are biologically plausible: (1) subtraction of firing rates integrated over longer time intervals, and (2) detection of coincidence of individual spikes within shorter time intervals. However, the exact mechanism of ILD evaluation is not known. Furthermore, given the stochastic nature of neuronal activity, it is not clear how the circuit achieves the remarkable precision of ILD assessment observed experimentally. We employ a probabilistic model and complementary computer simulations to investigate whether the two general mechanisms are capable of the desired performance. Introducing the concept of an ideal observer, we determine the theoretical ILD accuracy expressed by means of the just-noticeable difference (JND) in dependence on the statistics of the interacting spike trains, the overall firing rate, detection time, the number of converging fibers, and on the neural mechanism itself. We demonstrate that the JNDs rely on the precision of spike timing; however, with an appropriate parameter setting, the lowest theoretical values are similar or better than the experimental values. Furthermore, a mechanism based on excitatory and inhibitory coincidence detection may give better results than the subtraction of firing rates. This article is part of a Special Issue entitled Neural Coding 2012.
- MeSH
- Action Potentials MeSH
- Sound Localization physiology MeSH
- Models, Neurological * MeSH
- Neurons physiology MeSH
- Olivary Nucleus physiology MeSH
- Computer Simulation MeSH
- Poisson Distribution MeSH
- Space Perception physiology MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
BACKGROUND: Subjective cognitive decline (SCD) may serve as a symptomatic indicator for preclinical Alzheimer's disease; however, SCD is a heterogeneous entity regarding clinical progression. We aimed to investigate whether spatial navigation could reveal subcortical structural alterations and the risk of progression to objective cognitive impairment in SCD individuals. METHODS: One hundred and eighty participants were enrolled: those with SCD (n = 80), normal controls (NCs, n = 77), and mild cognitive impairment (MCI, n = 23). SCD participants were further divided into the SCD-good (G-SCD, n = 40) group and the SCD-bad (B-SCD, n = 40) group according to their spatial navigation performance. Volumes of subcortical structures were calculated and compared among the four groups, including basal forebrain, thalamus, caudate, putamen, pallidum, hippocampus, amygdala, and accumbens. Topological properties of the subcortical structural covariance network were also calculated. With an interval of 1.5 years ± 12 months of follow-up, the progression rate to MCI was compared between the G-SCD and B-SCD groups. RESULTS: Volumes of the basal forebrain, the right hippocampus, and their respective subfields differed significantly among the four groups (p < 0.05, false discovery rate corrected). The B-SCD group showed lower volumes in the basal forebrain than the G-SCD group, especially in the Ch4p and Ch4a-i subfields. Furthermore, the structural covariance network of the basal forebrain and right hippocampal subfields showed that the B-SCD group had a larger Lambda than the G-SCD group, which suggested weakened network integration in the B-SCD group. At follow-up, the B-SCD group had a significantly higher conversion rate to MCI than the G-SCD group. CONCLUSION: Compared to SCD participants with good spatial navigation performance, SCD participants with bad performance showed lower volumes in the basal forebrain, a reorganized structural covariance network of subcortical nuclei, and an increased risk of progression to MCI. Our findings indicated that spatial navigation may have great potential to identify SCD subjects at higher risk of clinical progression, which may contribute to making more precise clinical decisions for SCD individuals who seek medical help.
Knowledge on spatial distribution of crop yield in relation to fixed soil fertilisation with exogenous organic materials is essential for improving precise crop and soil management practices within a field. This study assessed the effect of various application rates and types of exogenous (recycled) organic materials (EOMs) containing different organic matter and nitrogen contents vs. mineral nitrogen on the yield of maize by means of linear regressions (trends), spatial kriging-interpolated maps, and Bland-Altman statistics. The experiments were conducted in 2013 and 2014 on two soils, i.e. loam silt in Braszowice (Poland) and clay silt loam in Pusté Jakartice (Czech Republic) under a cross-border cooperation project. The organic materials included compost from manure, slurry, and straw (Ag), industrial organic compost from sewage sludge (Ra), animal meal from animal by-products (Mb), and digestate from a biogas fries factory (Dg). The following 3 application rates of each EOM were adjusted according to the reference 100% = 200 kg N ha-1: 50 (50% N from EOM and 50% mineral N), 75 (75% N from EOM and 25% mineral N), and 100 (100% N from EOM). 100% mineral N was applied on control plots. All treatments were carried out in 4 replicates. The linear regressions between the EOM application rates and the maize yield were in general ascending in the Braszowice soil and descending in the more productive Pusté Jakartice soil. The spatial kriging-interpolated maps allowed separating zones of lower and higher yields with EOMs compared to the control. They were attributed in part to the different EOM application rates and soil water contents. The Bland-Altaman statistics showed that addition of 50% of N from EOMs in 2013 caused a decrease and an increase in the maize grain yield in Braszowice and Pusté Jakartice, respectively, whereas the inverse was true with the 75 and 100% EOM additions. In 2014, the yield of maize for silage increased with the increasing EOM application rate in Braszowice and decreased in Pusté Jakartice, but it was smaller on all EOM-amended plots than in the control. As shown by the limits of agreement lines, the maize yields were more even in Pusté Jakartice than Braszowice. These results provide helpful information for selection of the most yield-producing EOM rates depending on the site soil conditions and prevalent weather conditions.
- MeSH
- Composting * MeSH
- Zea mays growth & development MeSH
- Crop Production * MeSH
- Fertilizers * MeSH
- Soil * MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Geographicals
- Czech Republic MeSH
- Poland MeSH
The manuscript presents a procedure for optimal sample preparation and the mapping of the spatial distribution of metal ions and nanoparticles in plant roots using laser-induced breakdown spectroscopy (LIBS) in a double-pulse configuration (DP LIBS) in orthogonal reheating mode. Two Nd:YAG lasers were used; the first one was an ablation laser (UP-266 MACRO, New Wave, USA) with a wavelength of 266nm, and the second one (Brilliant, Quantel, France), with a fundamental wavelength of 1064nm, was used to reheat the microplasma. Seedlings of Vicia faba were cultivated for 7 days in CuSO4 or AgNO3 solutions with a concentration of 10µmoll-1 or in a solution of silver nanoparticles (AgNPs) with a concentration of 10µmoll-1 of total Ag, and in distilled water as a control. The total contents of the examined metals in the roots after sample mineralization as well as changes in the concentrations of the metals in the cultivation solutions were monitored by ICP-OES. Root samples embedded in the TissueTek medium and cut into 40µm thick cross sections using the Cryo-Cut Microtome proved to be best suited for an accurate LIBS analysis with a 50µm spatial resolution. 2D raster maps of elemental distribution were created for the emission lines of Cu(I) at 324.754nm and Ag(I) at 328.068nm. The limits of detection of DP LIBS for the root cross sections were estimated to be 4pg for Cu, 18pg for Ag, and 3pg for AgNPs. The results of Ag spatial distribution mapping indicated that unlike Ag+ ions, AgNPs do not penetrate into the inner tissues of Vicia faba roots but stay in their outermost layers. The content of Ag in roots cultivated in the AgNP solution was one order of magnitude lower compared to roots cultivated in the metal ion solutions. The significantly smaller concentration of Ag in root tissues cultivated in the AgNP solution also supports the conclusion that the absorption and uptake of AgNPs by roots of Vicia faba is very slow. LIBS mapping of root sections represents a fast analytical method with sufficient precision and spatial resolution that can provide very important information for researchers, particularly in the fields of plant science and ecotoxicology.
The field of precision radiation therapy has seen remarkable advancements in both experimental and computational methods. Recent literature has introduced various approaches such as Spatially Fractionated Radiation Therapy (SFRT). This unconventional treatment, demanding high-precision radiotherapy, has shown promising clinical outcomes. A comprehensive computational scheme for SFRT, extrapolated from a case report, is proposed. This framework exhibits exceptional flexibility, accommodating diverse initial conditions (shape, inhomogeneity, etc.) and enabling specific choices for sub-volume selection with administrated higher radiation doses. The approach integrates the standard linear quadratic model and, significantly, considers the activation of the immune system due to radiotherapy. This activation enhances the immune response in comparison to the untreated case. We delve into the distinct roles of the native immune system, immune activation by radiation, and post-radiotherapy immunotherapy, discussing their implications for either complete recovery or disease regrowth.
- Publication type
- Journal Article MeSH
Place navigation is essential for an animal's survival and this behavior has attracted the attention of scientists focused on the neural and neuropharmacological bases of learning and memory. Many navigational tests are employed today, such as the Morris water maze (MWM) which demands a precise representation of an unmarked place. Another spatial paradigm is the active place avoidance task. It requires mainly cognitive coordination in contrast to the MWM. Various rat strains are used in the research of animal models of cognitive impairments. The aim of this study was to compare sensitivity to the administration of higher doses (1.5mg/kg and 3mg/kg) of the central cholinergic blocker, scopolamine in outbred Long-Evans and Wistar rats. The results showed that while Wistar rats were more strongly affected by cholinergic blockade in the active place avoidance than Long-Evans rats, no differences were seen in the MWM. Long-Evans rats also showed better baseline performance in the active place avoidance and visible platform versions of the MWM (the latter suggesting better vision). This study demonstrated task-specific inter-strain differences in sensitivity to central cholinergic blockade in an active place avoidance task requiring cognitive coordination.
- MeSH
- Muscarinic Antagonists pharmacology MeSH
- Maze Learning drug effects MeSH
- Electroshock MeSH
- Rats MeSH
- Motor Activity drug effects MeSH
- Rats, Long-Evans MeSH
- Rats, Wistar MeSH
- Psychomotor Performance drug effects MeSH
- Scopolamine pharmacology MeSH
- Avoidance Learning drug effects MeSH
- Animals MeSH
- Check Tag
- Rats MeSH
- Male MeSH
- Animals MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Comparative Study MeSH
The soil and human health issues are closely linked. Properly managed nitrogen (N) does not endanger human health and increases crop production, nevertheless when overused and uncontrolled, can contribute to side effects. This research was intended to highlight that there is a need for carrying out monitoring studies in agricultural areas in order to expand the available knowledge on the content of N forms in agricultural lands and proper management in farming practice. The impact of two types of fertilization, concerning spatially variable (VRA) and uniform (UNI) N dose, on the distribution of N forms in soils was analyzed. The analysis was performed on the basis of soil monitoring data from agricultural fields located in three different experimental sites in Poland. The analyses performed at selected sites were supported by statistical evaluation and recognition of spatial diversification of N forms in soil. It was revealed that the movement of unused N forms to deeper parts of the soil, and therefore to the groundwater system, is more limited due to VRA fertilization. Finally, it was also concluded that the management in agricultural practice should be based on the prediction of spatial variability of soil properties that allow to ensure proper application of N fertilizers, resulting in the reduction of possible N losses.
- MeSH
- Nitrogen * analysis MeSH
- Humans MeSH
- Fertilizers analysis MeSH
- Soil * MeSH
- Agriculture MeSH
- Check Tag
- Humans MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Geographicals
- Poland MeSH
BACKGROUND: The hippocampal representation of space, formed by the collective activity of populations of place cells, is considered as a substrate of spatial memory. Alzheimer's disease (AD), a widespread severe neurodegenerative condition of multifactorial origin, typically exhibits spatial memory deficits among its early clinical signs before more severe cognitive impacts develop. OBJECTIVE: To investigate mechanisms of spatial memory impairment in a double transgenic rat model of AD. METHODS: In this study, we utilized 9-12-month-old double-transgenic TgF344-AD rats and age-matched controls to analyze the spatial coding properties of CA1 place cells. We characterized the spatial memory representation, assessed cells' spatial information content and direction-specific activity, and compared their population coding in familiar and novel conditions. RESULTS: Our findings revealed that TgF344-AD animals exhibited lower precision in coding, as evidenced by reduced spatial information and larger receptive zones. This impairment was evident in maps representing novel environments. While controls instantly encoded directional context during their initial exposure to a novel environment, transgenics struggled to incorporate this information into the newly developed hippocampal spatial representation. This resulted in impairment in orthogonalization of stored activity patterns, an important feature directly related to episodic memory encoding capacity. CONCLUSIONS: Overall, the results shed light on the nature of impairment at both the single-cell and population levels in the transgenic AD model. In addition to the observed spatial coding inaccuracy, the findings reveal a significantly impaired ability to adaptively modify and refine newly stored hippocampal memory patterns.
- MeSH
- Alzheimer Disease * physiopathology MeSH
- Amyloid beta-Protein Precursor genetics MeSH
- CA1 Region, Hippocampal physiopathology MeSH
- Hippocampus physiopathology MeSH
- Rats MeSH
- Humans MeSH
- Disease Models, Animal * MeSH
- Memory Disorders etiology physiopathology MeSH
- Rats, Inbred F344 MeSH
- Rats, Transgenic * MeSH
- Spatial Memory physiology MeSH
- Animals MeSH
- Check Tag
- Rats MeSH
- Humans MeSH
- Male MeSH
- Animals MeSH
- Publication type
- Journal Article MeSH
PURPOSE OF REVIEW: The objective of this review is to discuss the strength and limitations of tissue and liquid biopsy and functional imaging to capture spatial and temporal tumor heterogeneity either alone or as part of a diagnostic framework in non-small cell lung cancer (NSCLC). RECENT FINDINGS: NSCLC displays genetic and phenotypic heterogeneity - a detailed knowledge of which is crucial to personalize treatment. Tissue biopsy often lacks spatial and temporal resolution. Thus, NSCLC needs to be characterized by complementary diagnostic methods to resolve heterogeneity. Liquid biopsy offers detection of tumor biomarkers and for example, the classification and monitoring of EGFR mutations in NSCLC. It allows repeated sampling, and therefore, appears promising to address temporal aspects of tumor heterogeneity. Functional imaging methods and emerging image analytic tools, such as radiomics capture temporal and spatial heterogeneity. Further standardization of radiomics is required to allow introduction into clinical routine. SUMMARY: To augment the potential of precision therapy, improved diagnostic characterization of tumors is pivotal. We suggest a comprehensive diagnostic framework combining tissue and liquid biopsy and functional imaging to address the known aspects of spatial and temporal tumor heterogeneity on the example of NSCLC. We envision how this framework might be implemented in clinical practice.
