spatiotemporal specificity Dotaz Zobrazit nápovědu
BACKGROUND: Although evidence indicates that load carriage may have an influence on walking patterns, the specific impacts of progressively increased loads on spatial and temporal gait asymmetries remain underexplored. Therefore, the primary aim of this study was to examine whether an increased load carriage had an effect on spatiotemporal gait asymmetries among intervention police officers. METHODS: For the purpose of this study, 96 male intervention police officers were recruited and assessed under four load conditions: (i) "No load", (ii) "a 5 kg load", (iii) "a 25 kg load", and (iv) "a 45 kg load". Spatial and temporal gait parameters were measured using a pedobarographic platform (Zebris FDM). The spatial and temporal gait parameters, along with the ground reaction forces beneath different foot regions, were examined. The gait asymmetry for each parameter was calculated using the formula (xright - xleft)/0.5 × (xright + xleft)*100%, where "x" represents the numerical value of each parameter for the left and right sides of the body. RESULTS: The findings indicated no statistically significant differences in the spatiotemporal parameters, nor ground reaction force gait asymmetries between the left and right foot, during walking under a progressively increased load carriage. Additionally, the parameter values for both the left and right sides of the body remained consistent, with a high intercorrelation observed across all of the loading conditions. The gait speed and ground reaction forces, which served as covariates, did not significantly change the spatiotemporal gait asymmetries. CONCLUSIONS: In summary, this study demonstrates that an increased load carriage did not lead to a progressive rise in spatiotemporal gait asymmetries in professional intervention police officers. However, further examination using an advanced 3-D gait analysis and an assessment of physiological patterns and adaptations is recommended to identify and confirm the key factors influencing gait asymmetry.
- Publikační typ
- časopisecké články MeSH
We studied the diversity of Limnohabitans using reverse line blot hybridization with Limnohabitans lineage-specific probes in the freshwater canyon-shaped Římov reservoir (Czech Republic). To examine the succession of distinct lineages, we performed (i) a study of an intensive spring sampling program at the lacustrine part of the Římov reservoir (from ice melt through a phytoplankton peak to the clear-water phase), and (ii) a seasonal study (April to November) when the occurrence of distinct Limnohabitans lineages was related to the inherent longitudinal heterogeneity of the reservoir. Significant spatiotemporal changes in the compositions of distinct Limnohabitans lineages allowed for the identification of "generalists" that were always present throughout the whole season as well as "specialists" that appeared in the reservoir only for limited periods of time or irregularly. Our results indicate that some phytoplankton groups, such as cryptophytes or cyanobacteria, and zooplankton composition were the major factors modulating the distribution and dynamics of distinct Limnohabitans lineages. The highest Limnohabitans diversity was observed during the spring algal bloom, whereas the lowest was during the summer cyanobacterial bloom. The microdiversity also markedly increased upstream in the reservoir, being highest at the inflow, and thus likely reflecting strong influences of the watershed.IMPORTANCE The genus Limnohabitans is a typical freshwater bacterioplankton and is believed to play a significant role in inland freshwater habitats. This work is unique in detecting and tracing different closely related lineages of this bacterial genus in its natural conditions using the semiquantitative reverse line blot hybridization method and in discovering the factors influencing the microdiversity, subtype alternations, and seasonality.
- MeSH
- Comamonadaceae klasifikace genetika izolace a purifikace MeSH
- Cryptophyta růst a vývoj MeSH
- ekosystém MeSH
- eutrofizace MeSH
- fytoplankton růst a vývoj MeSH
- roční období MeSH
- sinice růst a vývoj MeSH
- sladká voda mikrobiologie MeSH
- Publikační typ
- časopisecké články MeSH
- Geografické názvy
- Česká republika MeSH
Factors that drive parasite specificity and differences in infection dynamics among alternative host species are important for ecology and evolution of host-parasite interactions, but still often poorly known in natural systems. Here, we investigated spatiotemporal dynamics of infection, host susceptibility and parasite-induced changes in host phenotype in a rarely explored host-parasite system, the Australapatemon sp. trematode infecting two sympatric species of freshwater leeches, Erpobdella octoculata and Helobdella stagnalis. We show significant variation in infection abundance between the host species in both space and time. Using experimental infections, we also show that most of this variation likely comes from interspecific differences in exposure rather than susceptibility. Moreover, we demonstrate that the hiding behaviour of E. octoculata, but not that of H. stagnalis, was impaired by the infection irrespective of the parasite abundance. This may increase susceptibility of E. octoculata to predation by the final avian host. We conclude that differences in patterns of infection and in behavioural alterations among alternative sympatric host species may arise in narrow spatial scales, which emphasises the importance of local infection and transmission dynamics for parasite life cycles.
Recent ground-breaking developments in Omics have generated new hope for overcoming the complexity and variability of biological systems while simultaneously shedding more light on fundamental radiobiological questions that have remained unanswered for decades. In the era of Omics, our knowledge of how genes and proteins interact in the frame of complex networks to preserve genome integrity has been rapidly expanding. Nevertheless, these functional networks must be observed with strong correspondence to the cell nucleus, which is the main target of ionizing radiation. Nuclear architecture and nuclear processes, including DNA damage responses, are precisely organized in space and time. Information regarding these intricate processes cannot be achieved using high-throughput Omics approaches alone, but requires sophisticated structural probing and imaging. Based on the results obtained from studying the relationship between higher-order chromatin structure, DNA double-strand break induction and repair, and the formation of chromosomal translocations, we show the development of Omics solutions especially for radiation research (radiomics) (discussed in this article) and how confocal microscopy as well as novel approaches of molecular localization nanoscopy fill the gaps to successfully place the Omics data in the context of space and time (discussed in our other article in this issue, "Determining Omics Spatiotemporal Dimensions Using Exciting New Nanoscopy Techniques to Assess Complex Cell Responses to DNA Damage: Part B--Structuromics"). Finally, we introduce a novel method of specific chromatin nanotargeting and speculate future perspectives, which may combine nanoprobing and structural nanoscopy to observe structure-function correlations in living cells in real time. Thus, the Omics networks obtained from function analyses may be enriched by real-time visualization of Structuromics.
- MeSH
- buněčné jádro genetika MeSH
- chromatin účinky záření MeSH
- DNA účinky záření MeSH
- genom genetika účinky záření MeSH
- ionizující záření MeSH
- lidé MeSH
- nádorové buněčné linie MeSH
- nestabilita genomu účinky záření MeSH
- oprava DNA * MeSH
- poškození DNA genetika účinky záření MeSH
- radiobiologie * MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- přehledy MeSH
Recent groundbreaking developments in Omics and bioinformatics have generated new hope for overcoming the complexity and variability of (radio)biological systems while simultaneously shedding more light on fundamental radiobiological questions that have remained unanswered for decades. In the era of Omics, our knowledge of how genes and dozens of proteins interact in the frame of complex signaling and repair pathways (or, rather, networks) to preserve the integrity of the genome has been rapidly expanding. Nevertheless, these functional networks must be observed with strong correspondence to the cell nucleus, which is the main target of ionizing radiation. Information regarding these intricate processes cannot be achieved using high-throughput Omics approaches alone; it requires sophisticated structural probing and imaging. In the first part of this review, the article "Giving Omics Spatiotemporal Dimensions Using Exciting New Nanoscopy Techniques to Assess Complex Cell Responses to DNA Damage: Part A--Radiomics," we showed the development of different Omics solutions and how they are contributing to a better understanding of cellular radiation response. In this Part B we show how high-resolution confocal microscopy as well as novel approaches of molecular localization nanoscopy fill the gaps to successfully place Omics data in the context of space and time. The dynamics of double-strand breaks during repair processes and chromosomal rearrangements at the microscale correlated to aberration induction are explained. For the first time we visualize pan-nuclear nucleosomal rearrangements and clustering at the nanoscale during repair processes. Finally, we introduce a novel method of specific chromatin nanotargeting based on a computer database search of uniquely binding oligonucleotide combinations (COMBO-FISH). With these challenging techniques on hand, we speculate future perspectives that may combine specific COMBO-FISH nanoprobing and structural nanoscopy to observe structure-function correlations in living cells in real-time. Thus, the Omics networks obtained from function analyses may be enriched by real-time visualization of Structuromics.
- MeSH
- buněčné jádro účinky záření MeSH
- chromatin genetika účinky záření MeSH
- DNA účinky záření MeSH
- dvouřetězcové zlomy DNA účinky záření MeSH
- genom genetika MeSH
- ionizující záření MeSH
- konfokální mikroskopie MeSH
- lidé MeSH
- nestabilita genomu MeSH
- oprava DNA genetika MeSH
- translokace genetická genetika účinky záření MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- přehledy MeSH
Element content and expression of genes of interest on single cell types, such as stomata, provide valuable insights into their specific physiology, improving our understanding of leaf gas exchange regulation. We investigated how far differences in stomatal conductance (gs ) can be ascribed to changes in guard cells functioning in amphistomateous leaves. gs was measured during the day on both leaf sides, on well-watered and drought-stressed trees (two Populus euramericana Moench and two Populus nigra L. genotypes). In parallel, guard cells were dissected for element content and gene expressions analyses. Both were strongly arranged according to genotype, and drought had the lowest impact overall. Normalizing the data by genotype highlighted a structure on the basis of leaf sides and time of day both for element content and gene expression. Guard cells magnesium, phosphorus, and chlorine were the most abundant on the abaxial side in the morning, where gs was at the highest. In contrast, genes encoding H+ -ATPase and aquaporins were usually more abundant in the afternoon, whereas genes encoding Ca2+ -vacuolar antiporters, K+ channels, and ABA-related genes were in general more abundant on the adaxial side. Our work highlights the unique physiology of each leaf side and their analogous rhythmicity through the day.
- MeSH
- genotyp MeSH
- komplementární DNA genetika izolace a purifikace MeSH
- listy rostlin genetika metabolismus MeSH
- mikroanalýza elektronovou sondou MeSH
- období sucha MeSH
- Populus klasifikace genetika metabolismus MeSH
- protonové ATPasy genetika metabolismus MeSH
- průduchy rostlin genetika metabolismus MeSH
- regulace genové exprese u rostlin MeSH
- RNA rostlin genetika izolace a purifikace MeSH
- rostlinné proteiny genetika metabolismus MeSH
- stromy genetika metabolismus MeSH
- transpirace rostlin fyziologie MeSH
- voda fyziologie MeSH
- vývoj rostlin MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
Glaucoma is a disease of the retina which is one of the most common causes of permanent blindness worldwide. This paper presents an automatic image processing based method for glaucoma diagnosis from the digital fundus image. In this paper wavelet feature extraction has been followed by optimized genetic feature selection combined with several learning algorithms and various parameter settings. Unlike the existing research works where the features are considered from the complete fundus or a sub image of the fundus, this work is based on feature extraction from the segmented and blood vessel removed optic disc to improve the accuracy of identification. The experimental results presented in this paper indicate that the wavelet features of the segmented optic disc image are clinically more significant in comparison to features of the whole or sub fundus image in the detection of glaucoma from fundus image. Accuracy of glaucoma identification achieved in this work is 94.7% and a comparison with existing methods of glaucoma detection from fundus image indicates that the proposed approach has improved accuracy of classification.
- MeSH
- algoritmy * MeSH
- discus nervi optici patologie MeSH
- dospělí MeSH
- glaukom patologie MeSH
- interpretace obrazu počítačem metody MeSH
- lidé středního věku MeSH
- lidé MeSH
- mladiství MeSH
- mladý dospělý MeSH
- reprodukovatelnost výsledků MeSH
- retinoskopie metody MeSH
- rozpoznávání automatizované metody MeSH
- senioři MeSH
- senzitivita a specificita MeSH
- strojové učení MeSH
- subtrakční technika MeSH
- vlnková analýza MeSH
- vylepšení obrazu metody MeSH
- Check Tag
- dospělí MeSH
- lidé středního věku MeSH
- lidé MeSH
- mladiství MeSH
- mladý dospělý MeSH
- mužské pohlaví MeSH
- senioři MeSH
- ženské pohlaví MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
Late-spring frosts (LSFs) affect the performance of plants and animals across the world's temperate and boreal zones, but despite their ecological and economic impact on agriculture and forestry, the geographic distribution and evolutionary impact of these frost events are poorly understood. Here, we analyze LSFs between 1959 and 2017 and the resistance strategies of Northern Hemisphere woody species to infer trees' adaptations for minimizing frost damage to their leaves and to forecast forest vulnerability under the ongoing changes in frost frequencies. Trait values on leaf-out and leaf-freezing resistance come from up to 1,500 temperate and boreal woody species cultivated in common gardens. We find that areas in which LSFs are common, such as eastern North America, harbor tree species with cautious (late-leafing) leaf-out strategies. Areas in which LSFs used to be unlikely, such as broad-leaved forests and shrublands in Europe and Asia, instead harbor opportunistic tree species (quickly reacting to warming air temperatures). LSFs in the latter regions are currently increasing, and given species' innate resistance strategies, we estimate that ∼35% of the European and ∼26% of the Asian temperate forest area, but only ∼10% of the North American, will experience increasing late-frost damage in the future. Our findings reveal region-specific changes in the spring-frost risk that can inform decision-making in land management, forestry, agriculture, and insurance policy.
- MeSH
- časoprostorová analýza MeSH
- fenotyp MeSH
- klimatické změny * MeSH
- lesy MeSH
- listy rostlin růst a vývoj MeSH
- nízká teplota * MeSH
- roční období * MeSH
- stromy růst a vývoj MeSH
- teplota MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Research Support, U.S. Gov't, Non-P.H.S. MeSH
- Geografické názvy
- Asie MeSH
- Evropa MeSH
- Severní Amerika MeSH
Wavelet transform (WT) is a commonly used method for noise suppression and feature extraction from biomedical images. The selection of WT system settings significantly affects the efficiency of denoising procedure. This comparative study analyzed the efficacy of the proposed WT system on real 292 ultrasound images from several areas of interest. The study investigates the performance of the system for different scaling functions of two basic wavelet bases, Daubechies and Symlets, and their efficiency on images artificially corrupted by three kinds of noise. To evaluate our extensive analysis, we used objective metrics, namely structural similarity index (SSIM), correlation coefficient, mean squared error (MSE), peak signal-to-noise ratio (PSNR) and universal image quality index (Q-index). Moreover, this study includes clinical insights on selected filtration outcomes provided by clinical experts. The results show that the efficiency of the filtration strongly depends on the specific wavelet system setting, type of ultrasound data, and the noise present. The findings presented may provide a useful guideline for researchers, software developers, and clinical professionals to obtain high quality images.
The ability to predict the runoff response of an urban catchment to rainfall is crucial for managing drainage systems effectively and controlling discharges from urban areas. In this paper we assess the potential of commercial microwave links (MWL) to capture the spatio-temporal rainfall dynamics and thus improve urban rainfall-runoff modelling. Specifically, we perform numerical experiments with virtual rainfall fields and compare the results of MWL rainfall reconstructions to those of rain gauge (RG) observations. In a case study, we are able to show that MWL networks in urban areas are sufficiently dense to provide good information on spatio-temporal rainfall variability and can thus considerably improve pipe flow prediction, even in small subcatchments. In addition, the better spatial coverage also improves the control of discharges from urban areas. This is especially beneficial for heavy rainfall, which usually has a high spatial variability that cannot be accurately captured by RG point measurements.
- MeSH
- časoprostorová analýza MeSH
- déšť MeSH
- mikrovlny MeSH
- monitorování životního prostředí metody MeSH
- plánování měst MeSH
- pohyb vody * MeSH
- telekomunikace * MeSH
- teoretické modely MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Česká republika MeSH
